RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 RBM4BQ9BQ04 359 aaKnown RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 RBM4Q9BWF3 364 aaKnown RBP12.99□□□□□ -0.33
VPS26A-205ENST00000489656 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 U3KQV3 271 aa12.99□□□□□ -0.33
VPS26A-205ENST00000489656 TRABD2BA6NFA1 517 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ADAM10O14672 748 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ITGA10O75578 1167 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 UBL4AP11441 157 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 PRG2P13727 222 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ELAVL4P26378 380 aaKnown RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 TAS2R41P59536 307 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ST3GAL3Q11203 375 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 PPP1R8Q12972 351 aaKnown RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 SKP2Q13309 424 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 PIN1Q13526 163 aaPredicted RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 TGIF1Q15583 401 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 MICAQ29983 383 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 EXOC3L2Q2M3D2 409 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 CRTC2Q53ET0 693 aaPredicted RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 FAHD1Q6P587 224 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 TMEM81Q6P7N7 255 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 OPN5Q6U736 354 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 PLEKHM3Q6ZWE6 761 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 MISPQ8IVT2 679 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 GALNT4Q8N4A0 578 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 LINC00471Q8N535 108 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 SLC5A8Q8N695 610 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 GIPC3Q8TF64 312 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 DNAJC9Q8WXX5 260 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 SPACA9Q96E40 222 aaPredicted RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ALPK1Q96QP1 1244 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 SECISBP2Q96T21 854 aaKnown RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 FNDC11Q9BVV2 318 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 TRIM2Q9C040 744 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 LAT2Q9GZY6 243 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 ZBTB20Q9HC78 741 aaPredicted RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 MAN2C1Q9NTJ4 1040 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 WASF3Q9UPY6 502 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 C15orf41Q9Y2V0 281 aa12.98□□□□□ -0.33
VPS26A-205ENST00000489656 MAGED1Q9Y5V3 778 aaPredicted RBP12.98□□□□□ -0.33
VPS26A-205ENST00000489656 TRAPPC13A5PLN9 417 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 FAAHO00519 579 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 DLGAP1O14490 977 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF264O43296 627 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
VPS26A-205ENST00000489656 CYP7B1O75881 506 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 GKN3PP0CG01 181 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 HTR2AP28223 471 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 CLK3P49761 638 aaKnown RBP12.97□□□□□ -0.33
VPS26A-205ENST00000489656 SSR4P51571 173 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 FBXW4P57775 412 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 EPS8Q12929 822 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 TRAM2Q15035 370 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 OR1Q1Q15612 314 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 CD226Q15762 336 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 ZNF791Q3KP31 576 aaPredicted RBP12.97□□□□□ -0.33
VPS26A-205ENST00000489656 CMPK2Q5EBM0 449 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 DCAF10Q5QP82 559 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 DCST1Q5T197 706 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 OTUD3Q5T2D3 398 aaPredicted RBP12.97□□□□□ -0.33
VPS26A-205ENST00000489656 KDM4DQ6B0I6 523 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 DESI1Q6ICB0 168 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 HS3ST5Q8IZT8 346 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 PHOSPHO1Q8TCT1 267 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 ADAMTS16Q8TE57 1224 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 GRHL3Q8TE85 626 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 FER1L6-AS2Q96M78 137 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 BARD1Q99728 777 aaKnown RBP12.97□□□□□ -0.33
VPS26A-205ENST00000489656 TBL1XR1Q9BZK7 514 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 HHATLQ9HCP6 504 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 PDP1Q9P0J1 537 aaPredicted RBP12.97□□□□□ -0.33
VPS26A-205ENST00000489656 RHCGQ9UBD6 479 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 KLK13Q9UKR3 277 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 RAB26Q9ULW5 256 aa12.97□□□□□ -0.33
VPS26A-205ENST00000489656 TRBV4-1A0A0J9YWV2 114 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 SH3PXD2BA1X283 911 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 C7orf72A4D263 438 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 CPSF4LA6NMK7 179 aaKnown RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 CDK2AP1O14519 115 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 TP53I11O14683 189 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 NDUFB5O43674 189 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 ADAM11O75078 769 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 LYPD3O95274 346 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 UBTFL6P0CB48 400 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 ANXA8P13928 327 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 FUT4P22083 530 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 SOX3P41225 446 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 SLC6A8P48029 635 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 RNF144AP50876 292 aaPredicted RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 GAS1P54826 345 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 RPP38P78345 283 aaKnown RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 HOXC5Q00444 222 aa12.96□□□□□ -0.33
VPS26A-205ENST00000489656 AIMP2Q13155 320 aaKnown RBP12.96□□□□□ -0.33
VPS26A-205ENST00000489656 CLN3Q13286 438 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms