RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CCDC71Q8IV32 467 aaPredicted RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 ZNF619Q8N2I2 560 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 GTPBP8Q8N3Z3 284 aaPredicted RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 MEIOBQ8N635 442 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 PNPT1Q8TCS8 783 aaKnown RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 UCN2Q96RP3 112 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 TUBA1CQ9BQE3 449 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 TMEM120AQ9BXJ8 343 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 PAIP1Q9H074 479 aaKnown RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 RAD21L1Q9H4I0 556 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 MTHFD2LQ9H903 347 aaPredicted RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 Q9UFV3 132 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 KCNE5Q9UJ90 142 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 ICAM5Q9UMF0 924 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CARD8Q9Y2G2 431 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 COL12A1Q99715 3063 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 PRAMEF27A3QJZ7 478 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CLIC1O00299 241 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 ZNF264O43296 627 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 H6PDO95479 791 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 IL2RAP01589 272 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 UBL4AP11441 157 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CEACAM8P31997 349 aaPredicted RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 ARFIP2P53365 341 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 MVDP53602 400 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CHRNEQ04844 493 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 FUT5Q11128 374 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CDSNQ15517 529 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 LRIF1Q5T3J3 769 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 FRRS1Q6ZNA5 592 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 EIF3MQ7L2H7 374 aaKnown RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 ANKFN1Q8N957 763 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 TOR1AIP2Q8NFQ8 470 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 OR5M1Q8NGP8 315 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 OR5W2Q8NH69 310 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 TSPEARQ8WU66 669 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 LAT2Q9GZY6 243 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 ZNF385DQ9H6B1 395 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 NCKAP5O14513 1909 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 MBD3L4A6NDZ8 208 aaPredicted RBP15.67■□□□□ 0.1
MDC1-206ENST00000489540 MBD3L3A6NE82 208 aaPredicted RBP15.67■□□□□ 0.1
MDC1-206ENST00000489540 MBD3L5A6NJ08 208 aaPredicted RBP15.67■□□□□ 0.1
MDC1-206ENST00000489540 TNFRSF21O75509 655 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 TOXO94900 526 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 CSTAP01040 98 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 CAPN3P20807 821 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 COL8A1P27658 744 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 GNA13Q14344 377 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 SYPL1Q16563 259 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 PLPPR5Q32ZL2 321 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 GTDC1Q4AE62 458 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 CBLN3Q6UW01 205 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 OLIG3Q7RTU3 272 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 ADGRE4PQ86SQ3 457 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 MBD3L2Q8NHZ7 208 aaPredicted RBP15.67■□□□□ 0.1
MDC1-206ENST00000489540 WNT2BQ93097 391 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 ARSGQ96EG1 525 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 AURKBQ96GD4 344 aaPredicted RBP15.67■□□□□ 0.1
MDC1-206ENST00000489540 KCNJ16Q9NPI9 418 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.67■□□□□ 0.1
MDC1-206ENST00000489540 CALML5Q9NZT1 146 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 P2RX2Q9UBL9 471 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 SLC35A3Q9Y2D2 325 aa15.67■□□□□ 0.1
MDC1-206ENST00000489540 TMEM247A6NEH6 219 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 CLCA1A8K7I4 914 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 H3BML4 177 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 NUDT14O95848 222 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 LINGO3P0C6S8 592 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 ETFAP13804 333 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
MDC1-206ENST00000489540 ADH6P28332 368 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 RNF144AP50876 292 aaPredicted RBP15.66■□□□□ 0.1
MDC1-206ENST00000489540 DSTNP60981 165 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 FGFBP1Q14512 234 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 RGNQ15493 299 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 MAPK14Q16539 360 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 PAGE3Q5JUK9 113 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 HIST2H2BCQ6DN03 193 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 UBQLNLQ8IYU4 475 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 TNIP2Q8NFZ5 429 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 GPR119Q8TDV5 335 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 ZG16BQ96DA0 208 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 TM9SF2Q99805 663 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 SLC38A1Q9H2H9 487 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 ZNF629Q9UEG4 869 aaPredicted RBP15.66■□□□□ 0.1
MDC1-206ENST00000489540 LEF1Q9UJU2 399 aaPredicted RBP15.66■□□□□ 0.1
MDC1-206ENST00000489540 NDUFAF1Q9Y375 327 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 GPC6Q9Y625 555 aaPredicted RBP15.66■□□□□ 0.1
MDC1-206ENST00000489540 GMEB1Q9Y692 573 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 PCNX1Q96RV3 2341 aa15.66■□□□□ 0.1
MDC1-206ENST00000489540 AGAP5A6NIR3 686 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 KDM4EB2RXH2 506 aaPredicted RBP15.65■□□□□ 0.1
MDC1-206ENST00000489540 SHISA8B8ZZ34 492 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 OIP5O43482 229 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 CYP7B1O75881 506 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 CHRM4P08173 479 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 TFPTP0C1Z6 253 aa15.65■□□□□ 0.1
MDC1-206ENST00000489540 HOXB9P17482 250 aaPredicted RBP15.65■□□□□ 0.1
MDC1-206ENST00000489540 PSMA4P25789 261 aaKnown RBP15.65■□□□□ 0.1
MDC1-206ENST00000489540 GRNP28799 593 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms