RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 HSD3B1P14060 373 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 GGT1P19440 569 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 ENPP1P22413 925 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 IGHV1-2P23083 117 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 HSD3B2P26439 372 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 MAGEA4P43358 317 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 C2orf80Q0P641 193 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 RFLNBQ8N5W9 214 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 C3orf49Q96BT1 292 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 ERP44Q9BS26 406 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 ADAM19Q9H013 955 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 C12orf65Q9H3J6 166 aaKnown RBP14.27□□□□□ -0.13
USP48-210ENST00000489108 GLIPR2Q9H4G4 154 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 CXorf36Q9H7Y0 433 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 ING1Q9UK53 422 aaPredicted RBP14.27□□□□□ -0.13
USP48-210ENST00000489108 MGAT4BQ9UQ53 548 aa14.27□□□□□ -0.13
USP48-210ENST00000489108 TENM1Q9UKZ4 2725 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 SLITRK5O94991 958 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 TGFAP01135 160 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 LINGO3P0C6S8 592 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 APEHP13798 732 aaKnown RBP14.26□□□□□ -0.13
USP48-210ENST00000489108 ITGA2P17301 1181 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 DDCP20711 480 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 TIA1P31483 386 aaKnown RBP eCLIP14.26□□□□□ -0.138e-8■■■■□ 26.3
USP48-210ENST00000489108 ZNF83P51522 516 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 BTKQ06187 659 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 ACSM2AQ08AH3 577 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 SLC29A2Q14542 456 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 UAP1Q16222 522 aaPredicted RBP14.26□□□□□ -0.13
USP48-210ENST00000489108 TMEM176BQ3YBM2 270 aaPredicted RBP14.26□□□□□ -0.13
USP48-210ENST00000489108 GLE1Q53GS7 698 aaKnown RBP14.26□□□□□ -0.13
USP48-210ENST00000489108 ACSM2BQ68CK6 577 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 TMEM108Q6UXF1 575 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 ZAR1Q86SH2 424 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 P2RY8Q86VZ1 359 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.26□□□□□ -0.13
USP48-210ENST00000489108 FAM110BQ8TC76 370 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 GPR151Q8TDV0 419 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 ACPTQ9BZG2 426 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 HHATLQ9HCP6 504 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 GRHL1Q9NZI5 618 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 NFU1Q9UMS0 254 aa14.26□□□□□ -0.13
USP48-210ENST00000489108 OR5H1A6NKK0 313 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 ZNF195O14628 629 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 KRT6AP02538 564 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 KRT6BP04259 564 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 NGFRP08138 427 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 ANXA4P09525 319 aaPredicted RBP14.25□□□□□ -0.13
USP48-210ENST00000489108 DHRS4L1P0CG22 281 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 PTAFRP25105 342 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 CD40P25942 277 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 HSD17B3P37058 310 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 NR4A2P43354 598 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 KRT6CP48668 564 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 PRIM2P49643 509 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 SERPINB8P50452 374 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 FOXF1Q12946 379 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 CR1LQ2VPA4 569 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 SPIN4Q56A73 249 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 SSX8Q7RTT4 187 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 SLC43A2Q8N370 569 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 ATP6V1C2Q8NEY4 427 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 OR52N5Q8NH56 324 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 B4GALNT2Q8NHY0 566 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 CDC26Q8NHZ8 85 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 AMDHD1Q96NU7 426 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 PSD2Q9BQI7 771 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 SHCBP1LQ9BZQ2 653 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 COQ10BQ9H8M1 238 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 BCO1Q9HAY6 547 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 EQTNQ9NQ60 294 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 GRID1Q9ULK0 1009 aa14.25□□□□□ -0.13
USP48-210ENST00000489108 ARFGEF3Q5TH69 2177 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 MEGF8Q7Z7M0 2845 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 IGHV4-61A0A0C4DH41 118 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 ESYT3A0FGR9 886 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 TTC36A6NLP5 189 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 ULK1O75385 1050 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 EGR1P18146 543 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 MAP3K8P41279 467 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 EIF1P41567 113 aaKnown RBP14.24□□□□□ -0.13
USP48-210ENST00000489108 HTR6P50406 440 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 PDLIM4P50479 330 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 PLTPP55058 493 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 CHRNEQ04844 493 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 CLCQ05315 142 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 TRADDQ15628 312 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 ZNF544Q6NX49 715 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 GALNT18Q6P9A2 607 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 BHLHB9Q6PI77 547 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 DEPDC4Q8N2C3 294 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 MMGT1Q8N4V1 131 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 ZNF433Q8N7K0 673 aaPredicted RBP14.24□□□□□ -0.13
USP48-210ENST00000489108 FOXN4Q96NZ1 517 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 ZNF300Q96RE9 604 aaPredicted RBP14.24□□□□□ -0.13
USP48-210ENST00000489108 TAS2R7Q9NYW3 318 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 KLHL9Q9P2J3 617 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 PMF1-BGLAPU3KQ54 211 aa14.24□□□□□ -0.13
USP48-210ENST00000489108 A0A1W2PR80 420 aa14.23□□□□□ -0.13
USP48-210ENST00000489108 GJE1A6NN92 205 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms