RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NBPF19A0A087WUL8 3843 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 UNC79Q9P2D8 2635 aa12.91□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF264O43296 627 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 EIF4E2O60573 245 aaKnown RBP12.9□□□□□ -0.34
BRCA1-218ENST00000489037 GUSBP08236 651 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 UBL4AP11441 157 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 MAGEA8P43361 318 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 CD226Q15762 336 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 TIGD2Q4W5G0 525 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 C6orf10Q5SRN2 563 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 PDSS1Q5T2R2 415 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 PDZK1Q5T2W1 519 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 OR2A2Q6IF42 318 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 HEPHL1Q6MZM0 1159 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 GDF7Q7Z4P5 450 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 LIX1LQ8IVB5 337 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 MCEMP1Q8IX19 187 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 GTPBP8Q8N3Z3 284 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-218ENST00000489037 RFWD2Q8NHY2 731 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 OIT3Q8WWZ8 545 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 UCN2Q96RP3 112 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 ZNF350Q9GZX5 532 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 ENKD1Q9H0I2 346 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 MED17Q9NVC6 651 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 CARD8Q9Y2G2 431 aa12.9□□□□□ -0.34
BRCA1-218ENST00000489037 C7orf72A4D263 438 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 SLC22A20A6NK97 555 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 KDM4EB2RXH2 506 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-218ENST00000489037 NPIPB9F8W1W9 429 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 FCMRO60667 390 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 TNFRSF21O75509 655 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 CYP7B1O75881 506 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 RCBTB2O95199 551 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 IL18BPO95998 194 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 ZCCHC18P0CG32 403 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 PEX19P40855 299 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 CDKN2CP42773 168 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 MRPL19P49406 292 aaKnown RBP12.89□□□□□ -0.35
BRCA1-218ENST00000489037 ASCL1P50553 236 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 CCR4P51679 360 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF117Q03924 483 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 CBFBQ13951 182 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF141Q15928 474 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 PLPPR5Q32ZL2 321 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-218ENST00000489037 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
BRCA1-218ENST00000489037 ADGRE4PQ86SQ3 457 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF619Q8N2I2 560 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 OR9I1Q8NGQ6 314 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 EBF4Q9BQW3 602 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 SIKE1Q9BRV8 207 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 PRRG4Q9BZD6 226 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 RABEP2Q9H5N1 569 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 PAQR5Q9NXK6 330 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-218ENST00000489037 FOXD3Q9UJU5 478 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-218ENST00000489037 TRIM33Q9UPN9 1127 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 MPDZO75970 2070 aa12.89□□□□□ -0.35
BRCA1-218ENST00000489037 SHISA8B8ZZ34 492 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 HMGN4O00479 90 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 EIF1AYO14602 144 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 CSTAP01040 98 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 NR2F1P10589 423 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 SSTR2P30874 369 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 CRATP43155 626 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 RNF144AP50876 292 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 ATP4BP51164 291 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF136P52737 540 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 RAC1P63000 192 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 TFF3Q07654 80 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 GNA13Q14344 377 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 SQLEQ14534 574 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 TMEM44Q2T9K0 475 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 TYW3Q6IPR3 259 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 PPP4R4Q6NUP7 873 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 NAXEQ8NCW5 288 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 OR5W2Q8NH69 310 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 PNPT1Q8TCS8 783 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 ZFP90Q8TF47 636 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 INTS12Q96CB8 462 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 RNF145Q96MT1 663 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 TRNT1Q96Q11 434 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 SFXN3Q9BWM7 321 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 PINK1Q9BXM7 581 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 LAT2Q9GZY6 243 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 RAD21L1Q9H4I0 556 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 THUMPD1Q9NXG2 353 aaKnown RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 CCDC167Q9P0B6 97 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 CLCF1Q9UBD9 225 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 ICAM5Q9UMF0 924 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
BRCA1-218ENST00000489037 GPC6Q9Y625 555 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-218ENST00000489037 UQCRHLA0A096LP55 91 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms