RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RABL3Q5HYI8 236 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 NHSL2Q5HYW2 709 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 EMC4Q5J8M3 183 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 PRAMEF8Q5VWM4 474 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 PRAMEF7Q5VXH5 474 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 VASNQ6EMK4 673 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 ARSKQ6UWY0 536 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 PTOV1Q86YD1 416 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 CCDC197Q8NCU1 140 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 OR10A6Q8NH74 314 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 NFKBIDQ8NI38 313 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 SARAFQ96BY9 339 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 TIMP4Q99727 224 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 UGT2B28Q9BY64 529 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 TMEM38AQ9H6F2 299 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 ACAD8Q9UKU7 415 aa13.75□□□□□ -0.21
FDPS-213ENST00000489003 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
FDPS-213ENST00000489003 C15orf38-AP3S2A0A0A6YYH1 394 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 TRGV8A0A0C4DH27 118 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 C5orf58C9J3I9 102 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 CSTAP01040 98 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 TPOP07202 933 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 IL7RP16871 459 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 RPS4Y1P22090 263 aaKnown RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 TCEA1P23193 301 aaKnown RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 SLC6A2P23975 617 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 STARP49675 285 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 GFRA1P56159 465 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 CRYZQ08257 329 aaKnown RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 GANABQ14697 944 aaKnown RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 EIF3MQ7L2H7 374 aaKnown RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 VRK2Q86Y07 508 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 PEX5LQ8IYB4 626 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 FITM2Q8N6M3 262 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 OR5M1Q8NGP8 315 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 OR52P1PQ8NH57 321 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 GPR119Q8TDV5 335 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 ABTB1Q969K4 478 aaPredicted RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 RELTQ969Z4 430 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 ZNF524Q96C55 264 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 DTNBP1Q96EV8 351 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 ZNF583Q96ND8 569 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 GPATCH1Q9BRR8 931 aaKnown RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 RSPO3Q9BXY4 272 aaPredicted RBP13.74□□□□□ -0.21
FDPS-213ENST00000489003 PNPLA3Q9NST1 481 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 L3MBTL1Q9Y468 752 aa13.74□□□□□ -0.21
FDPS-213ENST00000489003 A0A087WZY1 265 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 PRRG2O14669 202 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 LRRTM2O43300 516 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 DNAJA2O60884 412 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CYP7B1O75881 506 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 UBTFL6P0CB48 400 aaPredicted RBP13.73□□□□□ -0.21
FDPS-213ENST00000489003 UBL4AP11441 157 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CA7P43166 264 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 PLAURQ03405 335 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 RBBP4Q09028 425 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 ART3Q13508 389 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 SCARB2Q14108 478 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 TOMM34Q15785 309 aaPredicted RBP13.73□□□□□ -0.21
FDPS-213ENST00000489003 TMEM44Q2T9K0 475 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 C1QL3Q5VWW1 255 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 FAM91A1Q658Y4 838 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 REEP3Q6NUK4 255 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 HACD2Q6Y1H2 254 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 NET1Q7Z628 596 aaPredicted RBP13.73□□□□□ -0.21
FDPS-213ENST00000489003 IFNEQ86WN2 208 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CALHM3Q86XJ0 350 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 ZZZ3Q8IYH5 903 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CLIP4Q8N3C7 705 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 OR5M9Q8NGP3 310 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 OR5W2Q8NH69 310 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 BBS10Q8TAM1 723 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 BCAS4Q8TDM0 211 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 WDR60Q8WVS4 1066 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CNOT9Q92600 299 aaKnown RBP13.73□□□□□ -0.21
FDPS-213ENST00000489003 ARSGQ96EG1 525 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 NPAS1Q99742 590 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 HOPXQ9BPY8 73 aaPredicted RBP13.73□□□□□ -0.21
FDPS-213ENST00000489003 ECSITQ9BQ95 431 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 PIF1Q9H611 641 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 MED17Q9NVC6 651 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CMTM6Q9NX76 183 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 TINAGQ9UJW2 476 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 VDAC3Q9Y277 283 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 SLC35A3Q9Y2D2 325 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 ZNF337Q9Y3M9 751 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 CHST2Q9Y4C5 530 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 HIVEP3Q5T1R4 2406 aa13.73□□□□□ -0.21
FDPS-213ENST00000489003 OR2M5A3KFT3 312 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 SHISA8B8ZZ34 492 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 BCKDKO14874 412 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 SEMA7AO75326 666 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
FDPS-213ENST00000489003 ACTL6AO96019 429 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 LINGO3P0C6S8 592 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms