RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ZNF611Q8N823 705 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 B4GALNT2Q8NHY0 566 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 RNF128Q8TEB7 428 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 MTERF3Q96E29 417 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 FAM120BQ96EK7 910 aaKnown RBP16.44■□□□□ 0.22
HDAC6-231ENST00000488905 TRMOQ9BU70 441 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 SIRT3Q9NTG7 399 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-231ENST00000488905 ZCCHC3Q9NUD5 404 aaKnown RBP16.44■□□□□ 0.22
HDAC6-231ENST00000488905 ZNF701Q9NV72 531 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-231ENST00000488905 MID2Q9UJV3 735 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 GPR52Q9Y2T5 361 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 ATRQ13535 2644 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 RTTNQ86VV8 2226 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 SMIM23A6NLE4 172 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 KIF2AO00139 706 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-231ENST00000488905 LINC00032P0C843 101 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 NID1P14543 1247 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 SHC1P29353 583 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 SFTPDP35247 375 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 EIF1P41567 113 aaKnown RBP16.43■□□□□ 0.22
HDAC6-231ENST00000488905 POU6F2P78424 691 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-231ENST00000488905 PPP2R2BQ00005 443 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 ZNF117Q03924 483 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 GALNTL6Q49A17 601 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 GTF2IRD2BQ6EKJ0 949 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 GTF2IRD2Q86UP8 949 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 TDRPQ86YL5 185 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 LILRA2Q8N149 483 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 ABHD3Q8WU67 409 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 OSTF1Q92882 214 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 CPNE4Q96A23 557 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-231ENST00000488905 STACQ99469 402 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 GATA5Q9BWX5 397 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-231ENST00000488905 BTBD2Q9BX70 525 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 PPCSQ9HAB8 311 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 DUSP22Q9NRW4 184 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 DNAJC15Q9Y5T4 150 aa16.43■□□□□ 0.22
HDAC6-231ENST00000488905 INAFM1C9JVW0 142 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 SCAMP2O15127 329 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 HMGN2P05204 90 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 DDX5P17844 614 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 KRT4P19013 534 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 HPCAL1P37235 193 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 LASP1Q14847 261 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 MLC1Q15049 377 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 TFAP2EQ6VUC0 442 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 R3HCC1LQ7Z5L2 792 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 MTERF4Q7Z6M4 381 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 C4orf33Q8N1A6 199 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 STEAP2Q8NFT2 490 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 KIF18AQ8NI77 898 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 EPS8L3Q8TE67 593 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 UBLCP1Q8WVY7 318 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 ROBO4Q8WZ75 1007 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 CDS1Q92903 461 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 S100PBPQ96BU1 408 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 CHMP6Q96FZ7 201 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 REXO5Q96IC2 774 aaKnown RBP16.42■□□□□ 0.22
HDAC6-231ENST00000488905 SRXN1Q9BYN0 137 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 KLHL13Q9P2N7 655 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 COL6A5A8TX70 2615 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 ABCA1O95477 2261 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 CUBNO60494 3623 aa16.42■□□□□ 0.22
HDAC6-231ENST00000488905 KIAA1324LA8MWY0 1029 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-231ENST00000488905 TMEM233B4DJY2 109 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 GCM2O75603 506 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-231ENST00000488905 BCKDHAP12694 445 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 ATP5J2P56134 94 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 CARD18P57730 90 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 RNPS1Q15287 305 aaKnown RBP16.41■□□□□ 0.22
HDAC6-231ENST00000488905 TMEM201Q5SNT2 666 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 LRIG3Q6UXM1 1119 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 DDIASQ8IXT1 998 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 GABRG1Q8N1C3 465 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 ZNF527Q8NB42 609 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 PHOSPHO1Q8TCT1 267 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 TWIST2Q8WVJ9 160 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 AKAP1Q92667 903 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC6-231ENST00000488905 TACO1Q9BSH4 297 aaKnown RBP16.41■□□□□ 0.22
HDAC6-231ENST00000488905 PIGUQ9H490 435 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 TIGARQ9NQ88 270 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 GIN1Q9NXP7 522 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 ATP6V1HQ9UI12 483 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 PLCE1Q9P212 2302 aa16.41■□□□□ 0.22
HDAC6-231ENST00000488905 NPIPA5A0A0B4J1W7 369 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 NPIPA7E9PJI5 369 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 PIP5K1BO14986 540 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 TRIM13O60858 407 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 NUDT14O95848 222 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 CHRNGP07510 517 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 NPIPA8P0DM63 369 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 ATP6V1C1P21283 382 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 RNF144AP50876 292 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-231ENST00000488905 SUMO3P55854 103 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-231ENST00000488905 RPS4XP62701 263 aaKnown RBP16.4■□□□□ 0.22
HDAC6-231ENST00000488905 CDC73Q6P1J9 531 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 CBLN3Q6UW01 205 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 OR7A2PQ8NGA2 310 aa16.4■□□□□ 0.22
HDAC6-231ENST00000488905 RAB3IL1Q8TBN0 382 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms