RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PPP4R4Q6NUP7 873 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
ITGB1-215ENST00000488494 KIF18BQ86Y91 864 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 WDR75Q8IWA0 830 aaKnown RBP15.97■□□□□ 0.15
ITGB1-215ENST00000488494 FAM222BQ8WU58 562 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 OR51I1Q9H343 314 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 PIGMQ9H3S5 423 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 CARD8Q9Y2G2 431 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 ZNF175Q9Y473 711 aa15.97■□□□□ 0.15
ITGB1-215ENST00000488494 PRSS51A0A1B0GVH4 220 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 TUBAL3A6NHL2 446 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 H3BNH8 94 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 SMNDC1O75940 238 aaKnown RBP eCLIP15.96■□□□□ 0.153e-8■□□□□ 9.4
ITGB1-215ENST00000488494 NUDT14O95848 222 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 AK1P00568 194 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 FCGR2AP12318 317 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 EIF1AXP47813 144 aaKnown RBP15.96■□□□□ 0.15
ITGB1-215ENST00000488494 ATP12AP54707 1039 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 RPS3AP61247 264 aaKnown RBP15.96■□□□□ 0.15
ITGB1-215ENST00000488494 TNFAIP8L2Q6P589 184 aaPredicted RBP15.96■□□□□ 0.15
ITGB1-215ENST00000488494 VWA1Q6PCB0 445 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 CBLN3Q6UW01 205 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 OLIG3Q7RTU3 272 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 C16orf62Q7Z3J2 963 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 SPATA19Q7Z5L4 167 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 TMCO5AQ8N6Q1 288 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 CHDHQ8NE62 594 aaPredicted RBP15.96■□□□□ 0.15
ITGB1-215ENST00000488494 VPS37AQ8NEZ2 397 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 MARK4Q96L34 752 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 SDF2Q99470 211 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 GPATCH1Q9BRR8 931 aaKnown RBP15.96■□□□□ 0.15
ITGB1-215ENST00000488494 SLC35A5Q9BS91 424 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 MANSC1Q9H8J5 431 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 RNF122Q9H9V4 155 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 STOML1Q9UBI4 398 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 ITGB1BP2Q9UKP3 347 aa15.96■□□□□ 0.15
ITGB1-215ENST00000488494 CENPVL1A0A0U1RR11 272 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 DUXAA6NLW8 204 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 A6NNC1 897 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 SLCO1B7G3V0H7 640 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 CTAG2O75638 210 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 OPN1LWP04000 364 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 CRHP06850 196 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 LINGO3P0C6S8 592 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 UBL4AP11441 157 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 UQCRC2P22695 453 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 ME2P23368 584 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 PSMA4P25789 261 aaKnown RBP15.95■□□□□ 0.14
ITGB1-215ENST00000488494 IL12AP29459 219 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 CHI3L1P36222 383 aaPredicted RBP15.95■□□□□ 0.14
ITGB1-215ENST00000488494 KHKP50053 298 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 SUMO3P55854 103 aaPredicted RBP15.95■□□□□ 0.14
ITGB1-215ENST00000488494 EEF1A1P68104 462 aaKnown RBP15.95■□□□□ 0.14
ITGB1-215ENST00000488494 SGCBQ16585 318 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 CTU2Q2VPK5 515 aaKnown RBP15.95■□□□□ 0.14
ITGB1-215ENST00000488494 PDZK1Q5T2W1 519 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 EEF1A1P5Q5VTE0 462 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 SAXO2Q658L1 398 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 NXNQ6DKJ4 435 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 MAVSQ7Z434 540 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 OR10D3Q8NH80 312 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 POC1BQ8TC44 478 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 MIPOL1Q8TD10 442 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 NRGNQ92686 78 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 ARL8AQ96BM9 186 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 CCDC115Q96NT0 180 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 ZBTB18Q99592 522 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 NMUR2Q9GZQ4 415 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 DNAJB12Q9NXW2 375 aaKnown RBP15.95■□□□□ 0.14
ITGB1-215ENST00000488494 ICAM5Q9UMF0 924 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 DTNAQ9Y4J8 743 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 GPR45Q9Y5Y3 372 aa15.95■□□□□ 0.14
ITGB1-215ENST00000488494 PCNX3Q9H6A9 2034 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 MED12LQ86YW9 2145 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 GTPBP1O00178 669 aaKnown RBP15.94■□□□□ 0.14
ITGB1-215ENST00000488494 TNFSF11O14788 317 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 STX11O75558 287 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 AQP8O94778 261 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 IL11P20809 199 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 SLC6A8P48029 635 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 P2RX1P51575 399 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 CCR4P51679 360 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 GPR68Q15743 365 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 AGBL2Q5U5Z8 902 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 RFWD2Q8NHY2 731 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 LINC01560Q8TB33 94 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 RAB8BQ92930 207 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 STARD4Q96DR4 205 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 NEURL3Q96EH8 262 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 ADGRG7Q96K78 797 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 POLDIP3Q9BY77 421 aaKnown RBP15.94■□□□□ 0.14
ITGB1-215ENST00000488494 ZNF350Q9GZX5 532 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 CLEC4MQ9H2X3 399 aaPredicted RBP15.94■□□□□ 0.14
ITGB1-215ENST00000488494 EXD2Q9NVH0 621 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 BTNL2Q9UIR0 455 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 MKLN1Q9UL63 735 aa15.94■□□□□ 0.14
ITGB1-215ENST00000488494 MSTNO14793 375 aa15.93■□□□□ 0.14
ITGB1-215ENST00000488494 KLF11O14901 512 aa15.93■□□□□ 0.14
ITGB1-215ENST00000488494 CXCL13O43927 109 aa15.93■□□□□ 0.14
ITGB1-215ENST00000488494 KIAA0513O60268 411 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms