RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 TRAM2Q15035 370 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 DECR1Q16698 335 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 LANCL3Q6ZV70 420 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ANKRD37Q7Z713 158 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 TSPYL5Q86VY4 417 aaPredicted RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 CMIPQ8IY22 773 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ZNF321PQ8N8H1 164 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ZSCAN1Q8NBB4 408 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 SLC7A13Q8TCU3 470 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 METTL21AQ8WXB1 218 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 LCORQ96JN0 433 aaPredicted RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 MCHR1Q99705 422 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 NUDT9Q9BW91 350 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ING2Q9H160 280 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 MAN2C1Q9NTJ4 1040 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 MRTO4Q9UKD2 239 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 NDRG4Q9ULP0 352 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 CLDN24A6NM45 220 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 K7ENP7 123 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 TPST2O60704 377 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 C1QL1O75973 258 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 KLK3P07288 261 aaPredicted RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 LCN1P31025 176 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 POLR2IP36954 125 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 RFX3P48380 749 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ZNF136P52737 540 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 EMP2P54851 167 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 TMPRSS3P57727 454 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 RAB15P59190 212 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 EBPQ15125 230 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 SEC23BQ15437 767 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ENTPD8Q5MY95 495 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 PDZK1Q5T2W1 519 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 INO80CQ6PI98 192 aaPredicted RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 SHISA6Q6ZSJ9 500 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 PLEKHM3Q6ZWE6 761 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 SLC29A4Q7RTT9 530 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 C17orf47Q8NEP4 570 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 SLC38A4Q969I6 547 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ADIPOR1Q96A54 375 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 SPSB2Q99619 263 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 APOL4Q9BPW4 351 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 NIPSNAP1Q9BPW8 284 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 DGCR6LQ9BY27 220 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 SEMA4CQ9C0C4 833 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 HOXD1Q9GZZ0 328 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 SLC39A1Q9NY26 324 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 TESQ9UGI8 421 aaKnown RBP11.72□□□□□ -0.53
NELFE-209ENST00000488426 C2orf92A0A1B0GVN3 265 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 SAGE2PA6NJ88 616 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 OR10H3O60404 316 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 CYP7B1O75881 506 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 SEC24DO94855 1032 aaPredicted RBP11.71□□□□□ -0.53
NELFE-209ENST00000488426 IL33O95760 270 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 SMIM18P0DKX4 95 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 CYP4B1P13584 511 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
NELFE-209ENST00000488426 UGT2B15P54855 530 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 FGFBP1Q14512 234 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 NNATQ16517 81 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 HLA-DQA1Q5Y7H0 255 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 PODNL1Q6PEZ8 512 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 C9orf40Q8IXQ3 194 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 B4GALNT2Q8NHY0 566 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 ADAMTS16Q8TE57 1224 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 FBLIM1Q8WUP2 373 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 HRASLS5Q96KN8 279 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 CCNL2Q96S94 520 aaPredicted RBP11.71□□□□□ -0.53
NELFE-209ENST00000488426 NXF5Q9H1B4 397 aaKnown RBP11.71□□□□□ -0.53
NELFE-209ENST00000488426 C19orf25Q9UFG5 118 aaPredicted RBP11.71□□□□□ -0.53
NELFE-209ENST00000488426 BLOC1S6Q9UL45 172 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 PPIEQ9UNP9 301 aaKnown RBP11.71□□□□□ -0.53
NELFE-209ENST00000488426 GMPPBQ9Y5P6 360 aa11.71□□□□□ -0.53
NELFE-209ENST00000488426 TEX51A0A1B0GUA7 166 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 TRIM64A6NGJ6 449 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 CPSF4LA6NMK7 179 aaKnown RBP11.7□□□□□ -0.54
NELFE-209ENST00000488426 TO15178 435 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 GASTP01350 101 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 ZNF28P17035 718 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 IFNGR2P38484 337 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 GPR143P51810 404 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 NUP107P57740 925 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 ISL1P61371 349 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 ESRRGP62508 458 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 RAPSNQ13702 412 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 APOFQ13790 326 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 LY6DQ14210 128 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 RBM48Q5RL73 367 aaKnown RBP11.7□□□□□ -0.54
NELFE-209ENST00000488426 BROXQ5VW32 411 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 PGBD2Q6P3X8 592 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 CCDC81Q6ZN84 652 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 ZNF527Q8NB42 609 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 OR4K5Q8NGD3 323 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 FAM81AQ8TBF8 368 aa11.7□□□□□ -0.54
NELFE-209ENST00000488426 SNRNP27Q8WVK2 155 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms