RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 APLFQ8IW19 511 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-211ENST00000487698 LSMEM1Q8N8F7 131 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF527Q8NB42 609 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 POGLUT1Q8NBL1 392 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PRSS33Q8NF86 280 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 MR1Q95460 341 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TP53INP1Q96A56 240 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ARSGQ96EG1 525 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 VMP1Q96GC9 406 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 RNF6Q9Y252 685 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 SLC35A3Q9Y2D2 325 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PCDHGA1Q9Y5H4 931 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 MPDZO75970 2070 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 MUC6Q6W4X9 2439 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TEX51A0A1B0GUA7 166 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 CDC14CA4D256 554 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PMS2P1A4D2B8 440 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 SOX14O95416 240 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ANGPTL1O95841 491 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 CSTAP01040 98 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 UMODP07911 640 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 NGFRP08138 427 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 GSTM3P21266 225 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TGM1P22735 817 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 FPR3P25089 353 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ABCD3P28288 659 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 IFNGR2P38484 337 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ALDH3B2P48448 385 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 CLDN6P56747 220 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TEKQ02763 1124 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TSPAN31Q12999 210 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 SKP2Q13309 424 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TOP3AQ13472 1001 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-211ENST00000487698 NCF4Q15080 339 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 CD226Q15762 336 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 NDUFAF6Q330K2 333 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 DCAF12Q5T6F0 453 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 SLX4IPQ5VYV7 408 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 APOOLQ6UXV4 268 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 RAB11FIP2Q7L804 512 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF550Q7Z398 422 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PRICKLE2Q7Z3G6 844 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PIP4P1Q86T03 277 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 NRMQ8IXM6 262 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PRR22Q8IZ63 422 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 GALNT6Q8NCL4 622 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 OR8K3Q8NH51 312 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 RHOXF1Q8NHV9 184 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 NUBPLQ8TB37 319 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PIGXQ8TBF5 258 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 FAM81AQ8TBF8 368 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 UBE2FQ969M7 185 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 OMA1Q96E52 524 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ADOQ96SZ5 270 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 LPAR4Q99677 370 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ZPBPQ9BS86 351 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF426Q9BUY5 554 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 DDA1Q9BW61 102 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 TRIM2Q9C040 744 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ADNPQ9H2P0 1102 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 PAK1IP1Q9NWT1 392 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF226Q9NYT6 803 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 AASSQ9UDR5 926 aa8.68□□□□□ -1.02
SF3B1-211ENST00000487698 C19orf25Q9UFG5 118 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-211ENST00000487698 GPN3Q9UHW5 284 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-211ENST00000487698 KNTC1P50748 2209 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 A0A1B0GWA3 101 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 A0A1W2PNU3 283 aaPredicted RBP8.67□□□□□ -1.02
SF3B1-211ENST00000487698 TMEM200CA6NKL6 621 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 C9J4A7 227 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 CHP2O43745 196 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 PIP5K1CO60331 668 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 ICOSLGO75144 302 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 CSO75390 466 aaKnown RBP8.67□□□□□ -1.02
SF3B1-211ENST00000487698 DLGAP3O95886 979 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 IGFBP1P08833 259 aaPredicted RBP8.67□□□□□ -1.02
SF3B1-211ENST00000487698 HTR1AP08908 422 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 LINGO3P0C6S8 592 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 KRT20P35900 424 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 PNLIPRP2P54317 469 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 SLC26A5P58743 744 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 PLCXD2Q0VAA5 305 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 NADK2Q4G0N4 442 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 CCDC157Q569K6 752 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 FAM69BQ5VUD6 431 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 C12orf73Q69YU5 71 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF773Q6PK81 442 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 HSDL2Q6YN16 418 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 KIF18BQ86Y91 864 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 CCDC103Q8IW40 242 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 ZNF440Q8IYI8 595 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 WDR36Q8NI36 951 aaKnown RBP8.67□□□□□ -1.02
SF3B1-211ENST00000487698 GNPDA2Q8TDQ7 276 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 C8orf44Q96CB5 159 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 FAM46AQ96IP4 442 aaKnown RBP8.67□□□□□ -1.02
SF3B1-211ENST00000487698 SPRY4Q9C004 299 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 TMEM27Q9HBJ8 222 aa8.67□□□□□ -1.02
SF3B1-211ENST00000487698 EXOSC3Q9NQT5 275 aaKnown RBP8.67□□□□□ -1.02
SF3B1-211ENST00000487698 RASSF1Q9NS23 344 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms