RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MZT2AQ6P582 158 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 OOSP2Q86WS3 158 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 MARCH9Q86YJ5 346 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 CA13Q8N1Q1 262 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 COX18Q8N8Q8 333 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 ZFP41Q8N8Y5 198 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 SPRYD4Q8WW59 207 aaPredicted RBP24.23■■□□□ 1.47
HLA-C-208ENST00000487245 PATE1Q8WXA2 126 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 SAMD8Q96LT4 415 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 RERGLQ9H628 205 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 FBXL21Q9UKT6 434 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 PCDHGB7Q9Y5F8 929 aa24.23■■□□□ 1.47
HLA-C-208ENST00000487245 MYO9BQ13459 2157 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 UNC119BA6NIH7 251 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 IGLV3-19P01714 112 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 NID1P14543 1247 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 RNF144AP50876 292 aaPredicted RBP24.22■■□□□ 1.47
HLA-C-208ENST00000487245 ID2Q02363 134 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 FZD5Q13467 585 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 VASNQ6EMK4 673 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 CXXC5Q7LFL8 322 aaKnown RBP24.22■■□□□ 1.47
HLA-C-208ENST00000487245 C11orf74Q86VG3 221 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 SLC22A18ASQ8N1D0 253 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 BBS1Q8NFJ9 593 aa24.22■■□□□ 1.47
HLA-C-208ENST00000487245 CDC42EP2O14613 210 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 IGHV4-34P06331 123 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 GCGRP47871 477 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 EVX1P49640 407 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.21■■□□□ 1.47
HLA-C-208ENST00000487245 PRICKLE4Q2TBC4 344 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 ARMC6Q6NXE6 501 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 TAF8Q7Z7C8 310 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SMRP1Q8NCR6 262 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SIMC1Q8NDZ2 872 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SLC37A2Q8TED4 501 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SECISBP2Q96T21 854 aaKnown RBP24.21■■□□□ 1.47
HLA-C-208ENST00000487245 CCDC3Q9BQI4 270 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 TMEM74BQ9NUR3 256 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 MAT2BQ9NZL9 334 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 LDB3O75112 727 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 LYPD3O95274 346 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 CELP19835 753 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 NUDT1P36639 197 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 RAB38P57729 211 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SHC2P98077 582 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 EIF2B5Q13144 721 aaKnown RBP24.21■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF791Q3KP31 576 aaPredicted RBP24.21■■□□□ 1.47
HLA-C-208ENST00000487245 ZFP69Q49AA0 526 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 ZNF362Q5T0B9 420 aaPredicted RBP24.21■■□□□ 1.47
HLA-C-208ENST00000487245 CNIH2Q6PI25 160 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 CPOQ8IVL8 374 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SLC44A3Q8N4M1 653 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 NEIL3Q8TAT5 605 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SLC7A6Q92536 515 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 MMP28Q9H239 520 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 RNF121Q9H920 327 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 ADAM30Q9UKF2 790 aa24.21■■□□□ 1.47
HLA-C-208ENST00000487245 SOCS6O14544 535 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 ZGLP1P0C6A0 271 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 HLA-DMAP28067 261 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 MAP3K8P41279 467 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 CCINQ13939 588 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 CCNJQ5T5M9 372 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 RPL13AP3Q6NVV1 102 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 NIPAL3Q6P499 406 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 PRSS41Q7RTY9 318 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 GALNT12Q8IXK2 581 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 ATP6V1C2Q8NEY4 427 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 ACOT12Q8WYK0 555 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 MSANTD3Q96H12 275 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 FRMD6Q96NE9 622 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 DCLRE1CQ96SD1 692 aaKnown RBP24.2■■□□□ 1.46
HLA-C-208ENST00000487245 TMED9Q9BVK6 235 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 COMMD3Q9UBI1 195 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 NDRG2Q9UN36 371 aaKnown RBP24.2■■□□□ 1.46
HLA-C-208ENST00000487245 CSNK1G3Q9Y6M4 447 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 LAMA3Q16787 3333 aa24.2■■□□□ 1.46
HLA-C-208ENST00000487245 SPTY2D1-AS1A0A0U1RR47 76 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 OR5K3A6NET4 321 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 SLC2A10O95528 541 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 CTSEP14091 401 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 MYL9P24844 172 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 MLLT3P42568 568 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 VSX2P58304 361 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 POU6F2P78424 691 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 MGAT2Q10469 447 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 TBRG1Q3YBR2 411 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 MEPCEQ7L2J0 689 aaKnown RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 TMEFF1Q8IYR6 380 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 Q8N9G6 341 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 OR52D1Q9H346 318 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 TCEAL2Q9H3H9 227 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 SEMA6CQ9H3T2 930 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 TBC1D17Q9HA65 648 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 C14orf105Q9NVL8 296 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 ARHGEF17Q96PE2 2063 aaPredicted RBP24.19■■□□□ 1.46
HLA-C-208ENST00000487245 CENPXA8MT69 81 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 BHLHE40O14503 412 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 SLC19A2O60779 497 aa24.19■■□□□ 1.46
HLA-C-208ENST00000487245 CD53P19397 219 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms