RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LCN8Q6JVE9 175 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 SLC25A25Q6KCM7 469 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 TMEM81Q6P7N7 255 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 DHRS4L2Q6PKH6 230 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 IGFL3Q6UXB1 125 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 EIF3MQ7L2H7 374 aaKnown RBP11.67□□□□□ -0.54
HDAC6-229ENST00000486665 FAM86B1Q8N7N1 296 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF527Q8NB42 609 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 PSD4Q8NDX1 1056 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 OR52E4Q8NGH9 312 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 PHOSPHO1Q8TCT1 267 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 DUSP19Q8WTR2 217 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
HDAC6-229ENST00000486665 KLHDC3Q9BQ90 382 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 SPATA5L1Q9BVQ7 753 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 PINK1Q9BXM7 581 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 TBL1XR1Q9BZK7 514 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 MUC13Q9H3R2 512 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 TIMMDC1Q9NPL8 285 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 KLHL1Q9NR64 748 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 DEPPQ9NTK1 212 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 KLRF1Q9NZS2 232 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 CNIH4Q9P003 139 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 ABCG2Q9UNQ0 655 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 IFT52Q9Y366 437 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 ITPR2Q14571 2701 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 CENPEQ02224 2701 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 RP1L1Q8IWN7 2480 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 PINLYPA6NC86 204 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ANKRD33BA6NCL7 494 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 NDUFB5O43674 189 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 PRKD3O94806 890 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF682O95780 498 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 IFNA14P01570 189 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 P04436 131 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 FESP07332 822 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 TNFRSF1BP20333 461 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 CNR1P21554 472 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 PRKAR1BP31321 381 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ADH7P40394 386 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 DNASE1L1P49184 302 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 CLK3P49761 638 aaKnown RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 GPR85P60893 370 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SELENOWP63302 87 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SNTA1Q13424 505 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 CCNIQ14094 377 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 LARS2Q15031 903 aaKnown RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 LIN52Q52LA3 116 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF766Q5HY98 468 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 MRPL2Q5T653 305 aaKnown RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 OR5M10Q6IEU7 315 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SLC30A6Q6NXT4 461 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ENPP6Q6UWR7 440 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ASB18Q6ZVZ8 466 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 VTCN1Q7Z7D3 282 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SULF2Q8IWU5 870 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ZADH2Q8N4Q0 377 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 RBMXL3Q8N7X1 1067 aaKnown RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 BHLHE22Q8NFJ8 381 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 OR4D11Q8NGI4 311 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SLC26A7Q8TE54 656 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 ARSGQ96EG1 525 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SCMH1Q96GD3 660 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 TPD52L3Q96J77 140 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 RAB3IPQ96QF0 476 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-229ENST00000486665 OSBPL11Q9BXB4 747 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 MFRPQ9BY79 579 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 SACM1LQ9NTJ5 587 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 OLAHQ9NV23 265 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 CARD8Q9Y2G2 431 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 PCDHGB7Q9Y5F8 929 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 V9GYQ6 96 aa11.66□□□□□ -0.54
HDAC6-229ENST00000486665 MYO9AB2RTY4 2548 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CDHR4A6H8M9 788 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CFAP73A6NFT4 308 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 GTPBP1O00178 669 aaKnown RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 FRS3O43559 492 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 PEX1O43933 1283 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 NME2P1O60361 137 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 TRIM3O75382 744 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CIB2O75838 187 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 LGI1O95970 557 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CSTAP01040 98 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CD46P15529 392 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 NME2P22392 152 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 GNLYP22749 145 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 ELOAQ14241 798 aaKnown RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 FLOT2Q14254 428 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 C1orf146Q5VVC0 180 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 CBLN3Q6UW01 205 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 GALNTL5Q7Z4T8 443 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 RBM45Q8IUH3 476 aaKnown RBP11.65□□□□□ -0.54
HDAC6-229ENST00000486665 LACC1Q8IV20 430 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 EID3Q8N140 333 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 WDSUB1Q8N9V3 476 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 TEX19Q8NA77 164 aa11.65□□□□□ -0.54
HDAC6-229ENST00000486665 OIT3Q8WWZ8 545 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms