RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FBXW10Q5XX13 1052 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 WDR75Q8IWA0 830 aaKnown RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 GTPBP8Q8N3Z3 284 aaPredicted RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 RFWD2Q8NHY2 731 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 ACTRT2Q8TDY3 377 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 DYDC1Q8WWB3 177 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 RBM24Q9BX46 236 aaKnown RBP11.62□□□□□ -0.55
CHMP3-208ENST00000486404 PRRG4Q9BZD6 226 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 OR51I1Q9H343 314 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 TMEM185BQ9H7F4 350 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF175Q9Y473 711 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 POLQO75417 2590 aa11.62□□□□□ -0.55
CHMP3-208ENST00000486404 TACC2O95359 2948 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 C7orf72A4D263 438 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 TUBAL3A6NHL2 446 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 C9JVG2 144 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 H0YC42 278 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 DIAPH2O60879 1101 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 STX11O75558 287 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 SYNGR4O95473 234 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 TGM6O95932 706 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 PLGP00747 810 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 CRHP06850 196 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 EIF1P41567 113 aaKnown RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 SUCLG1P53597 346 aaKnown RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 ATP12AP54707 1039 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 CASP9P55211 416 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 TPD52P55327 224 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 CLDN15P56746 228 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 CLDN20P56880 219 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 UFM1P61960 85 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 SORDQ00796 357 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 LRRC74AQ0VAA2 488 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 FOXF1Q12946 379 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 FGFBP1Q14512 234 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 GPR68Q15743 365 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 PDSS1Q5T2R2 415 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 PDZK1Q5T2W1 519 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 TNFAIP8L2Q6P589 184 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 POMZP3Q6PJE2 187 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 METTL25Q8N6Q8 603 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 GLB1L3Q8NCI6 653 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 FNDC9Q8TBE3 224 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 PIWIL2Q8TC59 973 aaKnown RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 FIG4Q92562 907 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 MARK4Q96L34 752 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 ATP6V1G3Q96LB4 118 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 CCDC115Q96NT0 180 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 PANX1Q96RD7 426 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 NMUR2Q9GZQ4 415 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 SERHL2Q9H4I8 314 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 MCTS1Q9ULC4 181 aaKnown RBP11.61□□□□□ -0.55
CHMP3-208ENST00000486404 CARD8Q9Y2G2 431 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
CHMP3-208ENST00000486404 HEATR5AQ86XA9 2040 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 GJE1A6NN92 205 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 KLF11O14901 512 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 CYP7B1O75881 506 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 PGRP06401 933 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 OR12D1P0DN82 309 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 ELK4P28324 431 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 P2RX1P51575 399 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 KRTAP10-9P60411 292 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 TMEM44Q2T9K0 475 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 NDUFAF6Q330K2 333 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 KLHL26Q53HC5 615 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHMP3-208ENST00000486404 SAXO2Q658L1 398 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 DNAJC14Q6Y2X3 702 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-208ENST00000486404 GGNQ86UU5 652 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 CHDHQ8NE62 594 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-208ENST00000486404 TOR1AIP2Q8NFQ8 470 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 MIPOL1Q8TD10 442 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 FAM222BQ8WU58 562 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 ARL8AQ96BM9 186 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 NEURL3Q96EH8 262 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 SDF2Q99470 211 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 PAQR5Q9NXK6 330 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-208ENST00000486404 BTNL2Q9UIR0 455 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
CHMP3-208ENST00000486404 SERINC4A6NH21 518 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 UBDO15205 165 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 ZNF264O43296 627 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 OIP5O43482 229 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 KIAA0513O60268 411 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 SLC22A3O75751 556 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 CSTAP01040 98 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 SFTPDP35247 375 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 STX1BP61266 288 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 RAC1P63000 192 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 CBFBQ13951 182 aa11.59□□□□□ -0.55
CHMP3-208ENST00000486404 GSTA3Q16772 222 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms