RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 E9PBE3 544 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 ANKRD28O15084 1053 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 FCMRO60667 390 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 SNNO75324 88 aaPredicted RBP15.89■□□□□ 0.13
COL6A1-204ENST00000486023 TNFRSF21O75509 655 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 GSNP06396 782 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 UQCRC2P22695 453 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 PLPPR5Q32ZL2 321 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 SLC9B1Q4ZJI4 515 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 KLHL26Q53HC5 615 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL6A1-204ENST00000486023 OR2A2Q6IF42 318 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 VWA1Q6PCB0 445 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 SPATA19Q7Z5L4 167 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 ZBTB8AQ96BR9 441 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 SDF2Q99470 211 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 POLDIP3Q9BY77 421 aaKnown RBP15.89■□□□□ 0.13
COL6A1-204ENST00000486023 HHATLQ9HCP6 504 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 EXD2Q9NVH0 621 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 AIG1Q9NVV5 245 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 GALNT8Q9NY28 637 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 CLEC4AQ9UMR7 237 aa15.89■□□□□ 0.13
COL6A1-204ENST00000486023 ARHGAP21Q5T5U3 1957 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 TNFSF11O14788 317 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 SOX30O94993 753 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 IL11P20809 199 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 ME2P23368 584 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 IL12AP29459 219 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 SFTPDP35247 375 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 KCNJ5P48544 419 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 FBXL19-AS1Q494R0 122 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 PDZK1Q5T2W1 519 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 ATAD3BQ5T9A4 648 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF621Q6ZSS3 439 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 HMGN2P46Q86SG4 172 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 GGNQ86UU5 652 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 GTPBP8Q8N3Z3 284 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-204ENST00000486023 ACTRT2Q8TDY3 377 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF75CPQ92670 426 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-204ENST00000486023 TESCQ96BS2 214 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 ARSGQ96EG1 525 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 OR52E6Q96RD3 313 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 PANX1Q96RD7 426 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 SLC35A5Q9BS91 424 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 OPN3Q9H1Y3 402 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-204ENST00000486023 JKAMPQ9P055 326 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 PACSIN3Q9UKS6 424 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 DTNAQ9Y4J8 743 aa15.88■□□□□ 0.13
COL6A1-204ENST00000486023 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 SLCO1B7G3V0H7 640 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 CXCL13O43927 109 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 DIAPH2O60879 1101 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 SCN2BO60939 215 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 STX11O75558 287 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 TNFSF13O75888 250 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 SYNGR4O95473 234 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 PLGP00747 810 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-204ENST00000486023 C1QCP02747 245 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 ZNF17P17021 662 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 PEX19P40855 299 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 P2RX1P51575 399 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 SLC18A1P54219 525 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 FOXF1Q12946 379 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 TOMM34Q15785 309 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-204ENST00000486023 TMEM44Q2T9K0 475 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 GPAT3Q53EU6 434 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 AGBL2Q5U5Z8 902 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 OGFOD2Q6N063 350 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 BTLAQ7Z6A9 289 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
COL6A1-204ENST00000486023 LILRA2Q8N149 483 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 OR10D3Q8NH80 312 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 FBXO27Q8NI29 283 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 RAB3IL1Q8TBN0 382 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 POC1BQ8TC44 478 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 PNPT1Q8TCS8 783 aaKnown RBP15.87■□□□□ 0.13
COL6A1-204ENST00000486023 FAM222BQ8WU58 562 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 STARD4Q96DR4 205 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 INPP5KQ9BT40 448 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 CLEC4MQ9H2X3 399 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-204ENST00000486023 PIGMQ9H3S5 423 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 GPR45Q9Y5Y3 372 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 OTOGQ6ZRI0 2925 aa15.87■□□□□ 0.13
COL6A1-204ENST00000486023 SERINC4A6NH21 518 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 CCDC154A6NI56 674 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 A8MXE2 369 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 CTAG2O75638 210 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 AQP8O94778 261 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 SLC6A8P48029 635 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 RAC1P63000 192 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 EEF1A1P68104 462 aaKnown RBP15.86■□□□□ 0.13
COL6A1-204ENST00000486023 OCRLQ01968 901 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 FAM27E3Q08E93 113 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 EXOC3L2Q2M3D2 409 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 DPY19L1Q2PZI1 675 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 ARHGAP11BQ3KRB8 267 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 EEF1A1P5Q5VTE0 462 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 HBMQ6B0K9 141 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 LRRC34Q8IZ02 419 aa15.86■□□□□ 0.13
COL6A1-204ENST00000486023 METTL25Q8N6Q8 603 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms