RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SCDO00767 359 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 SDHDO14521 159 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 STX11O75558 287 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 CTAG2O75638 210 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 TNFSF13O75888 250 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 LINGO3P0C6S8 592 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 EPXP11678 715 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 HPGDP15428 266 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 H2AFXP16104 143 aaPredicted RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 ATP6V1C1P21283 382 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 MATN1P21941 496 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 BMP5P22003 454 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 KIR2DL3P43628 341 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 MRPL19P49406 292 aaKnown RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 P2RX1P51575 399 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 SUCLG1P53597 346 aaKnown RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 SUMO3P55854 103 aaPredicted RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 RPS3AP61247 264 aaKnown RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 MAGOHP61326 146 aaKnown RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 SRYQ05066 204 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 FGFBP1Q14512 234 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 GUSBP1Q15486 140 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ZNF141Q15928 474 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 PDCD2Q16342 344 aaPredicted RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 PGS1Q32NB8 556 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 SLC25A53Q5H9E4 307 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 OR4F3Q6IEY1 312 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 HEPHL1Q6MZM0 1159 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 FIGNL1Q6PIW4 674 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 CHMP1BQ7LBR1 199 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ZNF527Q8NB42 609 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 TOR1AIP2Q8NFQ8 470 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 NUDT8Q8WV74 236 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 NEURL3Q96EH8 262 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ADGRG7Q96K78 797 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 CCDC115Q96NT0 180 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ZNF559Q9BR84 538 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 NUF2Q9BZD4 464 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 RNF122Q9H9V4 155 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 PLSCR4Q9NRQ2 329 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 GLRX2Q9NS18 164 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 EXD2Q9NVH0 621 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 PNPOQ9NVS9 261 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 NKIRAS1Q9NYS0 192 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ICAM5Q9UMF0 924 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 RPH3AQ9Y2J0 694 aaPredicted RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 DTNAQ9Y4J8 743 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 SNX8Q9Y5X2 465 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 GPR45Q9Y5Y3 372 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 KCNE3Q9Y6H6 103 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 PRRC2AP48634 2157 aaKnown RBP6.31□□□□□ -1.4
VPS50-218ENST00000485994 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 MAP1AP78559 2803 aaPredicted RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 A0A1W2PNV4 684 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 ZNF195O14628 629 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 CFLARO15519 480 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 TGDSO95455 350 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 TGM6O95932 706 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 CGAP01215 116 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 IL6P05231 212 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 ALDOCP09972 364 aaKnown RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 ZCCHC18P0CG32 403 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 CD8BP10966 210 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 NID1P14543 1247 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 IDO1P14902 403 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 POU3F2P20265 443 aaPredicted RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 EFNA1P20827 205 aaPredicted RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 FKBP2P26885 142 aaKnown RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 ELK4P28324 431 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 KIR2DL2P43627 348 aaPredicted RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 DGKQP52824 942 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 IRX1P78414 480 aaPredicted RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 FOXF2Q12947 444 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 TESK1Q15569 626 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 GSTA3Q16772 222 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 PLPPR5Q32ZL2 321 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 SPDYE7PQ495Y7 208 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 FLYWCH1Q4VC44 716 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 DCST2Q5T1A1 773 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 PDSS1Q5T2R2 415 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 RAET1LQ5VY80 246 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 SAXO2Q658L1 398 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 GTF2IRD2BQ6EKJ0 949 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 ESPNLQ6ZVH7 1005 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 GTF2IRD2Q86UP8 949 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 GRAMD2AQ8IUY3 354 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 B4GALNT2Q8NHY0 566 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 PIWIL2Q8TC59 973 aaKnown RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 GPR119Q8TDV5 335 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 ZNF75CPQ92670 426 aaPredicted RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 CDS1Q92903 461 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 INTS12Q96CB8 462 aaKnown RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 STARD4Q96DR4 205 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 DACH2Q96NX9 599 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 OR7D2Q96RA2 312 aa6.3□□□□□ -1.4
VPS50-218ENST00000485994 PAIP2Q9BPZ3 127 aaKnown RBP6.3□□□□□ -1.4
VPS50-218ENST00000485994 YIPF4Q9BSR8 244 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms