RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 KLHL28Q9NXS3 571 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 DNAJB12Q9NXW2 375 aaKnown RBP16.05■□□□□ 0.16
CHMP3-207ENST00000485465 PPP4R1LQ9P1A2 415 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 SLC13A4Q9UKG4 626 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 CARD8Q9Y2G2 431 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 PCDHGB6Q9Y5F9 930 aa16.05■□□□□ 0.16
CHMP3-207ENST00000485465 IGLV3-32A0A0A0MS00 114 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 OIP5O43482 229 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 PEX1O43933 1283 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 EIF4E2O60573 245 aaKnown RBP16.04■□□□□ 0.16
CHMP3-207ENST00000485465 UBTFL6P0CB48 400 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-207ENST00000485465 GPR85P60893 370 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF117Q03924 483 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 SKP2Q13309 424 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 INPP5JQ15735 1006 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-207ENST00000485465 NDUFAF6Q330K2 333 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 ENPP6Q6UWR7 440 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 Q6ZS92 163 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 GALNTL5Q7Z4T8 443 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 VTCN1Q7Z7D3 282 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 SPATA24Q86W54 205 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 FAM86B1Q8N7N1 296 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 EXD3Q8N9H8 876 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 OR2M7Q8NG81 312 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 POP5Q969H6 163 aaKnown RBP16.04■□□□□ 0.16
CHMP3-207ENST00000485465 PYURFQ96I23 114 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 HSH2DQ96JZ2 352 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 ARHGDIGQ99819 225 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 EVA1AQ9H8M9 152 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF71Q9NQZ8 489 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-207ENST00000485465 MGAQ8IWI9 3026 aa16.04■□□□□ 0.16
CHMP3-207ENST00000485465 PINLYPA6NC86 204 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 KLRC4-KLRK1H3BQV0 150 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 GNB5O14775 395 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 SNPHO15079 494 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 HCRTR2O43614 444 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 CYP7B1O75881 506 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 MASP1P48740 699 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 CCNIQ14094 377 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF169Q14929 603 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-207ENST00000485465 NRF1Q16656 503 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 OR5M10Q6IEU7 315 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 CBLN3Q6UW01 205 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 FKBP9P1Q75LS8 142 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 PLCZ1Q86YW0 608 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF440Q8IYI8 595 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 WDSUB1Q8N9V3 476 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 B4GALNT2Q8NHY0 566 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 SLC35B4Q969S0 331 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 SH3YL1Q96HL8 342 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-207ENST00000485465 MFRPQ9BY79 579 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 EXOSC3Q9NQT5 275 aaKnown RBP16.03■□□□□ 0.16
CHMP3-207ENST00000485465 TUBA8Q9NY65 449 aaPredicted RBP16.03■□□□□ 0.16
CHMP3-207ENST00000485465 MED11Q9P086 117 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 SH3GLB1Q9Y371 365 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 HRH3Q9Y5N1 445 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 V9GYQ6 96 aa16.03■□□□□ 0.16
CHMP3-207ENST00000485465 ZZEF1O43149 2961 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 TNRC6AQ8NDV7 1962 aaKnown RBP16.02■□□□□ 0.16
CHMP3-207ENST00000485465 TCRBV3S1A0A5B6 114 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 B4DXG7 233 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 M0R3H8 397 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 FRS3O43559 492 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 GKN3PP0CG01 181 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 TNFRSF1BP20333 461 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 MSX1P28360 303 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 MEOX1P50221 254 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ERFP50548 548 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 P2RX1P51575 399 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ACTR3P61158 418 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 FOXO1Q12778 655 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 KPNB1Q14974 876 aaKnown RBP16.02■□□□□ 0.16
CHMP3-207ENST00000485465 IFI44LQ53G44 452 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 TIGD3Q6B0B8 471 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF550Q7Z398 422 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 CARM1Q86X55 608 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 LACC1Q8IV20 430 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 TMCO5AQ8N6Q1 288 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 FADS6Q8N9I5 356 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 OR4D11Q8NGI4 311 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 OR1J4Q8NGS1 313 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 GEMIN6Q8WXD5 167 aaKnown RBP16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ZNF597Q96LX8 424 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 JSRP1Q96MG2 331 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-207ENST00000485465 WFDC6Q9BQY6 131 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 UGT2B28Q9BY64 529 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 DSN1Q9H410 356 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 DENND2DQ9H6A0 471 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ZFP64Q9NPA5 681 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ICAM5Q9UMF0 924 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 BOKQ9UMX3 212 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-207ENST00000485465 B3GNT3Q9Y2A9 372 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 SLC9A8Q9Y2E8 581 aa16.02■□□□□ 0.16
CHMP3-207ENST00000485465 ACACBO00763 2458 aa16.02■□□□□ 0.15
CHMP3-207ENST00000485465 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 ERVH48-1M5A8F1 160 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 UMPSP11172 480 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 ELAVL4P26378 380 aaKnown RBP16.01■□□□□ 0.15
CHMP3-207ENST00000485465 OR1E2P47887 323 aa16.01■□□□□ 0.15
CHMP3-207ENST00000485465 RGS8P57771 180 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms