RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 ACKR1Q16570 336 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PLPPR5Q32ZL2 321 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 LSM12Q3MHD2 195 aaKnown RBP11.88□□□□□ -0.51
UBA3-210ENST00000485424 CPTPQ5TA50 214 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 ANKRD34AQ69YU3 496 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 HBMQ6B0K9 141 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 BEND4Q6ZU67 534 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 GGNQ86UU5 652 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 GTPBP8Q8N3Z3 284 aaPredicted RBP11.88□□□□□ -0.51
UBA3-210ENST00000485424 ZNF614Q8N883 585 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 ACTRT2Q8TDY3 377 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 ADAMTS15Q8TE58 950 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 HOXB13Q92826 284 aaPredicted RBP11.88□□□□□ -0.51
UBA3-210ENST00000485424 CDS1Q92903 461 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 CAVIN3Q969G5 261 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 GIMAP5Q96F15 307 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 C16orf58Q96GQ5 468 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 FCRL1Q96LA6 429 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 RNF145Q96MT1 663 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 STACQ99469 402 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 PIP5K1AQ99755 562 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 BTBD2Q9BX70 525 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 TUBB1Q9H4B7 451 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 HEATR1Q9H583 2144 aaKnown RBP11.88□□□□□ -0.51
UBA3-210ENST00000485424 TMEM185BQ9H7F4 350 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 TIGARQ9NQ88 270 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 MED17Q9NVC6 651 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 MKS1Q9NXB0 559 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 NTMQ9P121 344 aa11.88□□□□□ -0.51
UBA3-210ENST00000485424 A0A1W2PQD3 144 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 GJE1A6NN92 205 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 TMEM233B4DJY2 109 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 H7C1Q1 480 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 GTPBP1O00178 669 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 SPAG7O75391 227 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 SKAP2O75563 359 aaPredicted RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 SOX30O94993 753 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 CGAP01215 116 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 HMGN2P05204 90 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 TUBBP07437 444 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 CHRNGP07510 517 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 FGF4P08620 206 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 PABPC4LP0CB38 370 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 SFTPDP35247 375 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 MAP3K8P41279 467 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 EIF1P41567 113 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 CCT3P49368 545 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 MLC1Q15049 377 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 ARL13AQ5H913 290 aaPredicted RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 TMEM201Q5SNT2 666 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 MTERF4Q7Z6M4 381 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 FNDC5Q8NAU1 212 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 LRRN4CLQ8ND94 238 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 OR7A2PQ8NGA2 310 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 OR56A1Q8NGH5 318 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 OR2W6PQ8NHA6 318 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 OR2V1Q8NHB1 315 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 PPP1R14CQ8TAE6 165 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 FAM110BQ8TC76 370 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 NUDT8Q8WV74 236 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 FAM120BQ96EK7 910 aaKnown RBP11.87□□□□□ -0.51
UBA3-210ENST00000485424 Q96MF0 132 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 MECRQ9BV79 373 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 ACTRT3Q9BYD9 372 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 HOXD1Q9GZZ0 328 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 PLSCR4Q9NRQ2 329 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 DUSP22Q9NRW4 184 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 GIN1Q9NXP7 522 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 ATP6V1HQ9UI12 483 aa11.87□□□□□ -0.51
UBA3-210ENST00000485424 STAB1Q9NY15 2570 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 C7orf72A4D263 438 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 SS18L1O75177 396 aaPredicted RBP11.86□□□□□ -0.51
UBA3-210ENST00000485424 LYPLA1O75608 230 aaPredicted RBP11.86□□□□□ -0.51
UBA3-210ENST00000485424 SLU7O95391 586 aaKnown RBP11.86□□□□□ -0.51
UBA3-210ENST00000485424 SOAT1P35610 550 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 SERPINB5P36952 375 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 SLC6A8P48029 635 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 P2RX1P51575 399 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 CARD18P57730 90 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 MAD2L1Q13257 205 aaPredicted RBP11.86□□□□□ -0.51
UBA3-210ENST00000485424 TMEM44Q2T9K0 475 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 BEX5Q5H9J7 111 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 CDC73Q6P1J9 531 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 BHLHB9Q6PI77 547 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 ZCCHC23Q6ZST2 131 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 TRABD2AQ86V40 505 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 LILRA2Q8N149 483 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 BANPQ8N9N5 519 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 TCP10LQ8TDR4 215 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 OR5P2Q8WZ92 322 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 OSTF1Q92882 214 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 CPNE4Q96A23 557 aaPredicted RBP11.86□□□□□ -0.51
UBA3-210ENST00000485424 ARL8AQ96BM9 186 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 MOAP1Q96BY2 351 aa11.86□□□□□ -0.51
UBA3-210ENST00000485424 TUBGCP3Q96CW5 907 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms