RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CTNSO60931 367 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 LDB3O75112 727 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 UGT2B17O75795 530 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 OXSR1O95747 527 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 H1F0P07305 194 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 TNFRSF1BP20333 461 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 CD247P20963 164 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 EEF1B2P24534 225 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 RYKP34925 604 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 CASRP41180 1078 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 YAP1P46937 504 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 DAPP51397 102 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 HMGA2P52926 109 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 RRADP55042 308 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 SH3BGRP55822 239 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 PSMA6P60900 246 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 IL5RAQ01344 420 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ID2Q02363 134 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 KLRB1Q12918 225 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 LARS2Q15031 903 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ARHGAP11BQ3KRB8 267 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 CYP27C1Q4G0S4 372 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 IQCCQ4KMZ1 466 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 EIPR1Q53HC9 387 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF628Q5EBL2 1059 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF311Q5JNZ3 666 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 DCST1Q5T197 706 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ZNF691Q5VV52 312 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 JMJD6Q6NYC1 403 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 FAHD1Q6P587 224 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ISLR2Q6UXK2 745 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 DEF8Q6ZN54 512 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 GALNT5Q7Z7M9 940 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 LINC00471Q8N535 108 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 OR7G2Q8NG99 324 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 OR52J3Q8NH60 311 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 VANGL1Q8TAA9 524 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 DOK4Q8TEW6 326 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 HDAC2Q92769 488 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 MVB12AQ96EY5 273 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 FER1L6-AS2Q96M78 137 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 DGAT2Q96PD7 388 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ALPK1Q96QP1 1244 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 MBOAT4Q96T53 435 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 STACQ99469 402 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 WDR77Q9BQA1 342 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 FNDC11Q9BVV2 318 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 GRIP2Q9C0E4 1043 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 PIGUQ9H490 435 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 MTHFD2LQ9H903 347 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ADAP2Q9NPF8 381 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 MKKSQ9NPJ1 570 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 PRTFDC1Q9NRG1 225 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 PAPOLBQ9NRJ5 636 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 ANKRD10Q9NXR5 420 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 TMEFF2Q9UIK5 374 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 CDC14AQ9UNH5 594 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 NTNG1Q9Y2I2 539 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 WDR45Q9Y484 360 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 PCDHGB5Q9Y5G0 923 aa6.4□□□□□ -1.39
BRCA1-216ENST00000484087 PCDHGA9Q9Y5G4 932 aaKnown RBP6.4□□□□□ -1.39
BRCA1-216ENST00000484087 SETXQ7Z333 2677 aaKnown RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 CNTRLQ7Z7A1 2325 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 CCDC160A6NGH7 325 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 A6NJY4 79 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 TTC36A6NLP5 189 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 TTLL8A6PVC2 850 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 FAAHO00519 579 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 AP3D1O14617 1153 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 STX11O75558 287 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 CHRM4P08173 479 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PABPC4LP0CB38 370 aaKnown RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 SMIM18P0DKX4 95 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 IL7RP16871 459 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PRKAR1BP31321 381 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PTGER1P34995 402 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 IFNGR2P38484 337 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 MAN2A2P49641 1150 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 HLCSP50747 726 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 HSD17B7P56937 341 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 NUP107P57740 925 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 RHAGQ02094 409 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 NPRL3Q12980 569 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 MRPL49Q13405 166 aaKnown RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 APOFQ13790 326 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 SERTAD2Q14140 314 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 GANABQ14697 944 aaKnown RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 EXOC3L2Q2M3D2 409 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PRICKLE4Q2TBC4 344 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 PLEKHN1Q494U1 663 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 FGD3Q5JSP0 725 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 HEPHL1Q6MZM0 1159 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 FAM111BQ6SJ93 734 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 ANKRD37Q7Z713 158 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 TSPYL5Q86VY4 417 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-216ENST00000484087 GALNT12Q8IXK2 581 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
BRCA1-216ENST00000484087 COX18Q8N8Q8 333 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms