RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 OLIG3Q7RTU3 272 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 LSRQ86X29 649 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-221ENST00000483778 LILRA2Q8N149 483 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 OR6K3Q8NGY3 331 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 B4GALNT2Q8NHY0 566 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 PHOSPHO1Q8TCT1 267 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 TCP10LQ8TDR4 215 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 IGFBPL1Q8WX77 278 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 ARSGQ96EG1 525 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 CHMP6Q96FZ7 201 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 GMPPAQ96IJ6 420 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-221ENST00000483778 PIP5K1AQ99755 562 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 SRXN1Q9BYN0 137 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 PIGUQ9H490 435 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 C12orf49Q9H741 205 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 ZNF395Q9H8N7 513 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-221ENST00000483778 GPATCH2Q9NW75 528 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 MID2Q9UJV3 735 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 CARD8Q9Y2G2 431 aa16.09■□□□□ 0.17
ATG4B-221ENST00000483778 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-221ENST00000483778 A0A1W2PQD3 144 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 SCDO00767 359 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 PLGP00747 810 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-221ENST00000483778 FCGR2AP12318 317 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 SERPINB4P48594 390 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF41P51814 821 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-221ENST00000483778 FOXF1Q12946 379 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 FGFBP1Q14512 234 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 TSC22D1Q15714 1073 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 IL23RQ5VWK5 629 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 CDC73Q6P1J9 531 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 CLEC9AQ6UXN8 241 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 NUFIP2Q7Z417 695 aaKnown RBP16.08■□□□□ 0.16
ATG4B-221ENST00000483778 R3HCC1LQ7Z5L2 792 aaKnown RBP16.08■□□□□ 0.16
ATG4B-221ENST00000483778 P3H2Q8IVL5 708 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 CLEC4FQ8N1N0 589 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 PIGTQ969N2 578 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 ZBTB8AQ96BR9 441 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 COQ8BQ96D53 544 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 PERPQ96FX8 193 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 Q96MF0 132 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 CCL19Q99731 98 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 L2HGDHQ9H9P8 463 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 DUSP22Q9NRW4 184 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 EMC9Q9Y3B6 208 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 JMJD1CQ15652 2540 aa16.08■□□□□ 0.16
ATG4B-221ENST00000483778 TRIM64A6NGJ6 449 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 TRIM64BA6NI03 449 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 NPIPB9F8W1W9 429 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 H7C1Q1 480 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 SKAP2O75563 359 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-221ENST00000483778 SYNGR4O95473 234 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 HPGDP15428 266 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 AGTR1P30556 359 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 HPCAL1P37235 193 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 CARD18P57730 90 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF844Q08AG5 666 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 TP53BP2Q13625 1128 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ESPNLQ6ZVH7 1005 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 RIMKLAQ8IXN7 391 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ATP6V1C2Q8NEY4 427 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 OR5AK3PQ8NH89 298 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 FBXO27Q8NI29 283 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 PSMA8Q8TAA3 256 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 GPR119Q8TDV5 335 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ABHD3Q8WU67 409 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 OR5P2Q8WZ92 322 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 PPP3R2Q96LZ3 170 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 STACQ99469 402 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ACTRT3Q9BYD9 372 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 IQCGQ9H095 443 aaKnown RBP16.07■□□□□ 0.16
ATG4B-221ENST00000483778 SERHL2Q9H4I8 314 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 STOML1Q9UBI4 398 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 LGALS13Q9UHV8 139 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 MCTS1Q9ULC4 181 aaKnown RBP16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ICAM5Q9UMF0 924 aa16.07■□□□□ 0.16
ATG4B-221ENST00000483778 ALPK2Q86TB3 2170 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 ZNF195O14628 629 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 SMAD7O15105 426 aaKnown RBP16.06■□□□□ 0.16
ATG4B-221ENST00000483778 ARHGEF9O43307 516 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 LCN1P31025 176 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 VSNL1P62760 191 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 RPS26P62854 115 aaKnown RBP16.06■□□□□ 0.16
ATG4B-221ENST00000483778 TMEM176BQ3YBM2 270 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-221ENST00000483778 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
ATG4B-221ENST00000483778 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 LRRC75A-AS1Q8N1F1 130 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 OR5D16Q8NGK9 328 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 KLHL15Q96M94 604 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 KCNE5Q9UJ90 142 aa16.06■□□□□ 0.16
ATG4B-221ENST00000483778 CENPVL1A0A0U1RR11 272 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 ESPNB1AK53 854 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 TMEM114B3SHH9 223 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 ITM2AO43736 263 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-221ENST00000483778 FPR1P21462 350 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 HBA1P69905 142 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 DCST2Q5T1A1 773 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 ALKBH2Q6NS38 261 aa16.05■□□□□ 0.16
ATG4B-221ENST00000483778 ATG4DQ86TL0 474 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms