RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 H0Y3Z8 333 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 OIP5O43482 229 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 EIF4E2O60573 245 aaKnown RBP16.26■□□□□ 0.19
HDAC6-225ENST00000483506 DNAJA2O60884 412 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 POU3F2P20265 443 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-225ENST00000483506 CAPN3P20807 821 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 PSMA4P25789 261 aaKnown RBP16.26■□□□□ 0.19
HDAC6-225ENST00000483506 GRNP28799 593 aaKnown RBP16.26■□□□□ 0.19
HDAC6-225ENST00000483506 P2RX1P51575 399 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 TFF3Q07654 80 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 GPR68Q15743 365 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 HSPB2Q16082 182 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 GTDC1Q4AE62 458 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 COX20Q5RI15 118 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 LRIF1Q5T3J3 769 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 METTL21CQ5VZV1 264 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 SLC2A7Q6PXP3 512 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 CBLN3Q6UW01 205 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF619Q8N2I2 560 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 FAM71CQ8NEG0 241 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 TOR1AIP2Q8NFQ8 470 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 PMM1Q92871 262 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 SPDL1Q96EA4 605 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 ARSGQ96EG1 525 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 THOC1Q96FV9 657 aaKnown RBP16.26■□□□□ 0.19
HDAC6-225ENST00000483506 SH3YL1Q96HL8 342 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-225ENST00000483506 KLHDC3Q9BQ90 382 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 CLCF1Q9UBD9 225 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 MKLN1Q9UL63 735 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 TRIM33Q9UPN9 1127 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 PCDHB14Q9Y5E9 798 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 AP4B1Q9Y6B7 739 aa16.26■□□□□ 0.19
HDAC6-225ENST00000483506 HEATR5AQ86XA9 2040 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 A0A0G2JND7 137 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 ETV2O00321 342 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-225ENST00000483506 H6PDO95479 791 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 ANP32DO95626 131 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 LINGO3P0C6S8 592 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 UBL4AP11441 157 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 TCEA1P23193 301 aaKnown RBP16.25■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF41P51814 821 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-225ENST00000483506 CLDN15P56746 228 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 GUCY1A3Q02108 690 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 FGFBP1Q14512 234 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 MAPK11Q15759 364 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 MAPK14Q16539 360 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 AGKQ53H12 422 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 C6orf10Q5SRN2 563 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 LRRC74BQ6ZQY2 392 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 OLIG3Q7RTU3 272 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 NAXEQ8NCW5 288 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 TNIP2Q8NFZ5 429 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 OR10Q1Q8NGQ4 319 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 PNPT1Q8TCS8 783 aaKnown RBP16.25■□□□□ 0.19
HDAC6-225ENST00000483506 TRIB1Q96RU8 372 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 LAT2Q9GZY6 243 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 SLC38A1Q9H2H9 487 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 VDAC3Q9Y277 283 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 CARD8Q9Y2G2 431 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 L3MBTL1Q9Y468 752 aa16.25■□□□□ 0.19
HDAC6-225ENST00000483506 HCFC1P51610 2035 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 TRBV5-3A0A0A0MS03 114 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 A0A1W2PP18 115 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 CLCA1A8K7I4 914 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 NR5A2O00482 541 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 ZNF264O43296 627 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 GMFGO60234 142 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 CHRM4P08173 479 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 TROVE2P10155 538 aaKnown RBP eCLIP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 BMP2P12643 396 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 RPS4Y1P22090 263 aaKnown RBP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 ADH6P28332 368 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 EIF1P41567 113 aaKnown RBP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 HPCAP84074 193 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 CHRNEQ04844 493 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 SRYQ05066 204 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 SKP2Q13309 424 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 SYPL1Q16563 259 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 SLC25A35Q3KQZ1 300 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 SP5Q6BEB4 398 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 CGB2Q6NT52 195 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 POMZP3Q6PJE2 187 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 MEIOBQ8N635 442 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 ANKFN1Q8N957 763 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 OR5M1Q8NGP8 315 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 POC1BQ8TC44 478 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 GPR119Q8TDV5 335 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 WNT2BQ93097 391 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 AURKBQ96GD4 344 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 ZFP3Q96NJ6 502 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 NPAS1Q99742 590 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 TREX2Q9BQ50 279 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 FGFR1OP2Q9NVK5 253 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 THUMPD1Q9NXG2 353 aaKnown RBP16.24■□□□□ 0.19
HDAC6-225ENST00000483506 MAST4O15021 2626 aa16.24■□□□□ 0.19
HDAC6-225ENST00000483506 DSPPQ9NZW4 1301 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 INTS1Q8N201 2190 aaKnown RBP16.23■□□□□ 0.19
HDAC6-225ENST00000483506 ITPR2Q14571 2701 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 SHISA8B8ZZ34 492 aa16.23■□□□□ 0.19
HDAC6-225ENST00000483506 C19orf84I3L1E1 186 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms