RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SFRP4Q6FHJ7 346 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-218ENST00000482171 SDR16C5Q8N3Y7 309 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 ZNF676Q8N7Q3 588 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 DNAJC5GQ8N7S2 189 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 MAP3K3Q99759 626 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 SEC61A2Q9H9S3 476 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 SH2B3Q9UQQ2 575 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 DOCK6Q96HP0 2047 aa10.59□□□□□ -0.71
SMPD4-218ENST00000482171 PROM1O43490 865 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 MOSPD3O75425 235 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 RFPL3O75679 317 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ALX3O95076 343 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 RENP00797 406 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 GP1BBP13224 206 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 AHRP35869 848 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 GNALP38405 381 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 REEP5Q00765 189 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TIAL1Q01085 375 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ATXN7L3Q14CW9 347 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 FAM205BPQ63HN1 556 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 THEM6Q8WUY1 208 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SLC41A3Q96GZ6 507 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SAMD8Q96LT4 415 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 CSF3RQ99062 836 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TM9SF2Q99805 663 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 HOXD1Q9GZZ0 328 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SRA1Q9HD15 236 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PLSCR3Q9NRY6 295 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PSORS1C1Q9UIG5 152 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SLC7A7Q9UM01 511 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SNX11Q9Y5W9 270 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 OR2A25A4D2G3 310 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 GPX2P18283 190 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 APEX1P27695 318 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 EPHA5P54756 1037 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PUM1Q14671 1186 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 CTF1Q16619 201 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TMEM44Q2T9K0 475 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PRSS36Q5K4E3 855 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 FRMPD2BQ6IN97 320 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 FAM71E1Q6IPT2 247 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 GDPGP1Q6ZNW5 385 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TMPRSS9Q7Z410 1059 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TMEM151BQ8IW70 566 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 CDRT4Q8N9R6 151 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 BEST4Q8NFU0 473 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PJA1Q8NG27 643 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 OR52R1Q8NGF1 315 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 OR5T3Q8NGG3 340 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 RSC1A1Q92681 617 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ADAD1Q96M93 576 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ARL6Q9H0F7 186 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TCF7L1Q9HCS4 588 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SLC6A13Q9NSD5 602 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 EXOSC1Q9Y3B2 195 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PTPRFP10586 1907 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 CSN2P05814 226 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 OSMP13725 252 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SLC6A6P31641 620 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 NR0B1P51843 470 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 YPEL5P62699 121 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 MLF2Q15773 248 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 NKAIN2Q5VXU1 208 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ABHD17CQ6PCB6 329 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 RFPL4BQ6ZWI9 263 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ZNF550Q7Z398 422 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 OR4K17Q8NGC6 315 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 DAZLQ92904 295 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TAS2R10Q9NYW0 307 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 DHCR7Q9UBM7 475 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 GNG8Q9UK08 70 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PCDHGB2Q9Y5G2 931 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 C17orf105B2RV13 164 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PSMD9O00233 223 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 HPGDSO60760 199 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 AHSA1O95433 338 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 DBIP07108 87 aaKnown RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 CD22P20273 847 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 F8A1P23610 371 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 EDNRAP25101 427 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 PSMA3P25788 255 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 ACVR1BP36896 505 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 MTNR1AP48039 350 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 DUSP7Q16829 419 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 XAF1Q6GPH4 301 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 SPAG16Q8N0X2 631 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 OR4K13Q8NH42 304 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 NKD1Q969G9 470 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 C11orf54Q9H0W9 315 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-218ENST00000482171 POT1Q9NUX5 634 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 MGAT4CQ9UBM8 478 aa10.58□□□□□ -0.72
SMPD4-218ENST00000482171 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
SMPD4-218ENST00000482171 TCRBV5S2A0A599 114 aa10.57□□□□□ -0.72
SMPD4-218ENST00000482171 UNC119BA6NIH7 251 aa10.57□□□□□ -0.72
SMPD4-218ENST00000482171 FAM183AA6NL82 134 aa10.57□□□□□ -0.72
SMPD4-218ENST00000482171 EIF1AYO14602 144 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms