RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 TOXO94900 526 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 IL2RAP01589 272 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 GUSBP08236 651 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 NCF2P19878 526 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 TIMP3P35625 211 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 P2RX1P51575 399 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 SUMO3P55854 103 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 ZNF141Q15928 474 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 HSPB2Q16082 182 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 GTDC1Q4AE62 458 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 COX20Q5RI15 118 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 BLOC1S3Q6QNY0 202 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 CBLN3Q6UW01 205 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 FUNDC1Q8IVP5 155 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 ZNF619Q8N2I2 560 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 MEIOBQ8N635 442 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 SMPDL3BQ92485 455 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 GTF2H4Q92759 462 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 SPDL1Q96EA4 605 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 CALHM2Q9HA72 323 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 LIPT1Q9Y234 373 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 CENPVL1A0A0U1RR11 272 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 NKX2-6A6NCS4 301 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 MBD3L4A6NDZ8 208 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 MBD3L3A6NE82 208 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 SERINC4A6NH21 518 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 MBD3L5A6NJ08 208 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 ZNF264O43296 627 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 SEC14L5O43304 696 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 OIP5O43482 229 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 ATP8B1O43520 1251 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 TROVE2P10155 538 aaKnown RBP eCLIP18.79■□□□□ 0.6
NELFE-208ENST00000481121 MAGEA8P43361 318 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 TMEM44Q2T9K0 475 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 NDUFAF6Q330K2 333 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 AGKQ53H12 422 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 FRRS1Q6ZNA5 592 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 NAXEQ8NCW5 288 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 MBD3L2Q8NHZ7 208 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 OIT3Q8WWZ8 545 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 AURKBQ96GD4 344 aaPredicted RBP18.79■□□□□ 0.6
NELFE-208ENST00000481121 UCK2Q9BZX2 261 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 RABEP2Q9H5N1 569 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 TPT1P8Q9HAU6 139 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 KCNJ16Q9NPI9 418 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 TMEM45AQ9NWC5 275 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 KCNE5Q9UJ90 142 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 L3MBTL1Q9Y468 752 aa18.79■□□□□ 0.6
NELFE-208ENST00000481121 ITPR2Q14571 2701 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 C7orf72A4D263 438 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 C19orf84I3L1E1 186 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 H6PDO95479 791 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 CEACAM8P31997 349 aaPredicted RBP18.78■□□□□ 0.6
NELFE-208ENST00000481121 CRATP43155 626 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 CCR4P51679 360 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 GUCY1A3Q02108 690 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 SYPL1Q16563 259 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 CHMP1BQ7LBR1 199 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 GTPBP8Q8N3Z3 284 aaPredicted RBP18.78■□□□□ 0.6
NELFE-208ENST00000481121 RNF145Q96MT1 663 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 TRNT1Q96Q11 434 aaKnown RBP18.78■□□□□ 0.6
NELFE-208ENST00000481121 KLHDC3Q9BQ90 382 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 PAIP1Q9H074 479 aaKnown RBP18.78■□□□□ 0.6
NELFE-208ENST00000481121 SAP130Q9H0E3 1048 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 FGFR1OP2Q9NVK5 253 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 CLCF1Q9UBD9 225 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 STOML1Q9UBI4 398 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 P2RX2Q9UBL9 471 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 ICAM5Q9UMF0 924 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 AP4B1Q9Y6B7 739 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 MAST4O15021 2626 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 DCHS2Q6V1P9 2916 aa18.78■□□□□ 0.6
NELFE-208ENST00000481121 PKDREJQ9NTG1 2253 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 PRAMEF27A3QJZ7 478 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 EIF4E2O60573 245 aaKnown RBP18.77■□□□□ 0.6
NELFE-208ENST00000481121 CSTAP01040 98 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 VIMP08670 466 aaKnown RBP18.77■□□□□ 0.6
NELFE-208ENST00000481121 CAPN3P20807 821 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 EEFSECP57772 596 aaKnown RBP18.77■□□□□ 0.6
NELFE-208ENST00000481121 ADGRE4PQ86SQ3 457 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 GRAMD2AQ8IUY3 354 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 ANKFN1Q8N957 763 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 C9orf106Q8NAJ2 232 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 TOR1AIP2Q8NFQ8 470 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 TMEM120AQ9BXJ8 343 aa18.77■□□□□ 0.6
NELFE-208ENST00000481121 A0A096LPI6 279 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 CYSRT1A8MQ03 144 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 DVL2O14641 736 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 HNRNPRO43390 633 aaKnown RBP18.76■□□□□ 0.59
NELFE-208ENST00000481121 LINGO3P0C6S8 592 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 NR2F1P10589 423 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 ETFAP13804 333 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 MVDP53602 400 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 CLDN20P56880 219 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 DSTNP60981 165 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 CHRNEQ04844 493 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 FOXF1Q12946 379 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 FGFBP1Q14512 234 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 MAPK14Q16539 360 aa18.76■□□□□ 0.59
NELFE-208ENST00000481121 SLC25A35Q3KQZ1 300 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms