RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SFTPDP35247 375 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 PTGR1Q14914 329 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 CTU2Q2VPK5 515 aaKnown RBP13.65□□□□□ -0.22
LIMS3-203ENST00000480744 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 PDSS1Q5T2R2 415 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 C22orf34Q6ZV56 151 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 ESPNLQ6ZVH7 1005 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 HOMEZQ8IX15 550 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 RIBC1Q8N443 379 aaPredicted RBP13.65□□□□□ -0.22
LIMS3-203ENST00000480744 POC1BQ8TC44 478 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 TCP10LQ8TDR4 215 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 ACTRT2Q8TDY3 377 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 STACQ99469 402 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 C12orf49Q9H741 205 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 PLSCR4Q9NRQ2 329 aa13.65□□□□□ -0.22
LIMS3-203ENST00000480744 FAF1Q9UNN5 650 aaPredicted RBP13.65□□□□□ -0.22
LIMS3-203ENST00000480744 ROS1P08922 2347 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 PRR14LQ5THK1 2151 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 A0A1W2PQD3 144 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 C7orf72A4D263 438 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 CFLARO15519 480 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 HSPA4LO95757 839 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 C6orf47O95873 294 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 IL11P20809 199 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
LIMS3-203ENST00000480744 CCT3P49368 545 aaKnown RBP13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ZNF117Q03924 483 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 LTBQ06643 244 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 FOXF1Q12946 379 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 MLC1Q15049 377 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 XKR7Q5GH72 579 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 EXOSC6Q5RKV6 272 aaKnown RBP13.64□□□□□ -0.23
LIMS3-203ENST00000480744 IL23RQ5VWK5 629 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 CDC73Q6P1J9 531 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 LILRA2Q8N149 483 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ZNF614Q8N883 585 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 FNDC5Q8NAU1 212 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ZNF527Q8NB42 609 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 OR56A1Q8NGH5 318 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ADAMTS15Q8TE58 950 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 NUDT8Q8WV74 236 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ROBO4Q8WZ75 1007 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 OR5P2Q8WZ92 322 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 OSTF1Q92882 214 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ZBTB9Q96C00 473 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 PERPQ96FX8 193 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 C3orf30Q96M34 536 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 KLHL15Q96M94 604 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 PIP5K1AQ99755 562 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ACTRT3Q9BYD9 372 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 PIGUQ9H490 435 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 CXorf36Q9H7Y0 433 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 FANCFQ9NPI8 374 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 DUSP22Q9NRW4 184 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 ATAD3AQ9NVI7 634 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 LGALS13Q9UHV8 139 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 FREM1Q5H8C1 2179 aa13.64□□□□□ -0.23
LIMS3-203ENST00000480744 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
LIMS3-203ENST00000480744 H3BNH8 94 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 GTPBP1O00178 669 aaKnown RBP13.63□□□□□ -0.23
LIMS3-203ENST00000480744 ADAMDEC1O15204 470 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 OIP5O43482 229 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 THBDP07204 575 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 TUBBP07437 444 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 PPP3CBP16298 524 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 SHC1P29353 583 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 SOAT1P35610 550 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 EIF1P41567 113 aaKnown RBP13.63□□□□□ -0.23
LIMS3-203ENST00000480744 CARD18P57730 90 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 ZNF844Q08AG5 666 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 LSM12Q3MHD2 195 aaKnown RBP13.63□□□□□ -0.23
LIMS3-203ENST00000480744 BEX5Q5H9J7 111 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 C6orf136Q5SQH8 315 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 DCST2Q5T1A1 773 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 ALKBH2Q6NS38 261 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 CLEC9AQ6UXN8 241 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 STAC2Q6ZMT1 411 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 C20orf204Q6ZNR8 217 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 WFDC8Q8IUA0 241 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 LRRC75A-AS1Q8N1F1 130 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 KRTCAP2Q8N6L1 136 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 ATP6V1C2Q8NEY4 427 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 OR5AK3PQ8NH89 298 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 RFWD2Q8NHY2 731 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 REXO5Q96IC2 774 aaKnown RBP13.63□□□□□ -0.23
LIMS3-203ENST00000480744 MARK4Q96L34 752 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 Q96MF0 132 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 GLRX2Q9NS18 164 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 CARD8Q9Y2G2 431 aa13.63□□□□□ -0.23
LIMS3-203ENST00000480744 LYPLA1O75608 230 aaPredicted RBP13.62□□□□□ -0.23
LIMS3-203ENST00000480744 KRT16P08779 473 aa13.62□□□□□ -0.23
LIMS3-203ENST00000480744 LINGO3P0C6S8 592 aa13.62□□□□□ -0.23
LIMS3-203ENST00000480744 LOXP28300 417 aaPredicted RBP13.62□□□□□ -0.23
LIMS3-203ENST00000480744 AGTR1P30556 359 aa13.62□□□□□ -0.23
LIMS3-203ENST00000480744 ARRB2P32121 409 aa13.62□□□□□ -0.23
LIMS3-203ENST00000480744 NDUFAF6Q330K2 333 aa13.62□□□□□ -0.23
LIMS3-203ENST00000480744 GTF2IRD2BQ6EKJ0 949 aa13.62□□□□□ -0.23
LIMS3-203ENST00000480744 CBLN3Q6UW01 205 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms