RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 FAM120CQ9NX05 1096 aaKnown RBP10.25□□□□□ -0.77
USP11-208ENST00000480104 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
USP11-208ENST00000480104 A0A087WZY1 265 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 A0A1W2PRB8 838 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 SH3PXD2BA1X283 911 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 CLPSL1A2RUU4 121 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 C7orf72A4D263 438 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 TAPBPO15533 448 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 SEC14L2O76054 403 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 NGFP01138 241 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 CCDC175P0C221 793 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 HSPA7P48741 367 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 RELBQ01201 579 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 TSNQ15631 228 aaKnown RBP10.24□□□□□ -0.77
USP11-208ENST00000480104 TBCCQ15814 346 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 KCTD19Q17RG1 926 aaPredicted RBP10.24□□□□□ -0.77
USP11-208ENST00000480104 PLPPR5Q32ZL2 321 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 CPTPQ5TA50 214 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 ARMC3Q5W041 872 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 FBXW9Q5XUX1 488 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 OR7E24Q6IFN5 339 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 HUS1BQ8NHY5 278 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 ZNF75CPQ92670 426 aaPredicted RBP10.24□□□□□ -0.77
USP11-208ENST00000480104 UBE2E3Q969T4 207 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 MUS81Q96NY9 551 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 DOK1Q99704 481 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 COQ10BQ9H8M1 238 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 MED17Q9NVC6 651 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 NECAP2Q9NVZ3 263 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 TAS2R16Q9NYV7 291 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 NUP50Q9UKX7 468 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 OR10H1Q9Y4A9 318 aa10.24□□□□□ -0.77
USP11-208ENST00000480104 FAM181BA6NEQ2 426 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 AKR1B15C9JRZ8 316 aaPredicted RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 PLXNB1O43157 2135 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 PHGDHO43175 533 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 PPIHO43447 177 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 ERAL1O75616 437 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 ITGA5P08648 1049 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 ADRA2AP08913 450 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 TERF1P54274 439 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 NAP1L1P55209 391 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 GPX6P59796 221 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 PSPHP78330 225 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 SNX1Q13596 522 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 TRABD2AQ86V40 505 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 CCDC116Q8IYX3 515 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 CDK20Q8IZL9 346 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 NKAPQ8N5F7 415 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 CDYL2Q8N8U2 506 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 SLC16A11Q8NCK7 471 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 POC1BQ8TC44 478 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 C1orf54Q8WWF1 131 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 MTERF1Q99551 399 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 KCNS3Q9BQ31 491 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 KLHDC3Q9BQ90 382 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 MCMBPQ9BTE3 642 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 TCF7L1Q9HCS4 588 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 SLC17A5Q9NRA2 495 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 GAR1Q9NY12 217 aaKnown RBP10.23□□□□□ -0.77
USP11-208ENST00000480104 PLEK2Q9NYT0 353 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 AMDHD2Q9Y303 409 aa10.23□□□□□ -0.77
USP11-208ENST00000480104 C5orf63A6NC05 138 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 SMTNL1A8MU46 457 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 CCDC188H7C350 402 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 TTC4O95801 387 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 ANGPTL1O95841 491 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 OPN1MWP04001 364 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 CTAGE8P0CG41 777 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 OPN1MW2P0DN77 364 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 OPN1MW3P0DN78 364 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 ZNF37AP17032 561 aaPredicted RBP10.22□□□□□ -0.77
USP11-208ENST00000480104 ACHEP22303 614 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 COL8A2P25067 703 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 GPC1P35052 558 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 ARFIP1P53367 373 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 CDK16Q00536 496 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 C17orf67Q0P5P2 114 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 E2F2Q14209 437 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 ARMCX4Q5H9R4 360 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 C9orf135Q5VTT2 229 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 FAM180BQ6P0A1 224 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 APOOLQ6UXV4 268 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 RAD9BQ6WBX8 426 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 SPATA21Q7Z572 469 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 GALNT5Q7Z7M9 940 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 ADAMTSL2Q86TH1 951 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 NUDT13Q86X67 352 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 CTAGE4Q8IX94 777 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 TBL1XR1Q9BZK7 514 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 NAT10Q9H0A0 1025 aaKnown RBP10.22□□□□□ -0.77
USP11-208ENST00000480104 CNOT10Q9H9A5 744 aaKnown RBP10.22□□□□□ -0.77
USP11-208ENST00000480104 ZNF275Q9NSD4 429 aaPredicted RBP10.22□□□□□ -0.77
USP11-208ENST00000480104 ASB6Q9NWX5 421 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 C1RLQ9NZP8 487 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 UTS2RQ9UKP6 389 aa10.22□□□□□ -0.77
USP11-208ENST00000480104 IGHV1-18A0A0C4DH31 117 aa10.21□□□□□ -0.77
USP11-208ENST00000480104 TMEM129A0AVI4 362 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms