RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 IGKV1D-16P01601 117 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 P04436 131 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 DBIP07108 87 aaKnown RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 CCL3P10147 92 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 CYP4B1P13584 511 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 NID1P14543 1247 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 COX6B1P14854 86 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 EFNA1P20827 205 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 ATP6V1C1P21283 382 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ADH6P28332 368 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 SSTR2P30874 369 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 PRKAR1BP31321 381 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 PTGER1P34995 402 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 CLK3P49761 638 aaKnown RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 NUDT2P50583 147 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 RASSF2P50749 326 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 PRKAG1P54619 331 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 GABPB1Q06547 395 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 C17orf67Q0P5P2 114 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 FGFBP1Q14512 234 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 VMACQ2NL98 169 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 DNAL1Q4LDG9 190 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 CMPK2Q5EBM0 449 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 SLC25A53Q5H9E4 307 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 MTX3Q5HYI7 312 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 NHSL2Q5HYW2 709 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 SAMD4BQ5PRF9 694 aaKnown RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 COX20Q5RI15 118 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.11□□□□□ -1.11
DDX56-211ENST00000479602 TIGD3Q6B0B8 471 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 DHRS4L2Q6PKH6 230 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 DNAJC14Q6Y2X3 702 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 NCCRP1Q6ZVX7 275 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 PATL1Q86TB9 770 aaKnown RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 SULF2Q8IWU5 870 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ZNF440Q8IYI8 595 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 GHDCQ8N2G8 530 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 OR2M7Q8NG81 312 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 OR10G3Q8NGC4 313 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 OR4N2Q8NGD1 307 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 OR5D16Q8NGK9 328 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 RMND5BQ96G75 393 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 AURKBQ96GD4 344 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 ZNF597Q96LX8 424 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ZNF583Q96ND8 569 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 SPATA5L1Q9BVQ7 753 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ZNF703Q9H7S9 590 aaPredicted RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 ZFP64Q9NPA5 681 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ACKR4Q9NPB9 350 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 EQTNQ9NQ60 294 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 KLHL1Q9NR64 748 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ARL8BQ9NVJ2 186 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 ANGPT4Q9Y264 503 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 DTNAQ9Y4J8 743 aa8.11□□□□□ -1.11
DDX56-211ENST00000479602 PRRC2AP48634 2157 aaKnown RBP8.11□□□□□ -1.11
DDX56-211ENST00000479602 GXYLT2A0PJZ3 443 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 H3BNH8 94 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 NME4O00746 187 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 FMO6PO60774 539 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 ICOSLGO75144 302 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 REM1O75628 298 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 UGT2B17O75795 530 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 CBR3O75828 277 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 PGM3O95394 542 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 UTS2O95399 124 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 H6PDO95479 791 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 HPNP05981 417 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 GSNP06396 782 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 CHRM4P08173 479 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 OR12D1P0DN82 309 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 ESRRAP11474 423 aaPredicted RBP8.1□□□□□ -1.11
DDX56-211ENST00000479602 ETFAP13804 333 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 ZNF17P17021 662 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 FKBP2P26885 142 aaKnown RBP8.1□□□□□ -1.11
DDX56-211ENST00000479602 ELK4P28324 431 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 CRATP43155 626 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 CASP6P55212 293 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 RIPPLY3P57055 190 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 FBXW4P57775 412 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 CDK6Q00534 326 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 HSF1Q00613 529 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 OC90Q02509 493 aaPredicted RBP8.1□□□□□ -1.11
DDX56-211ENST00000479602 BNIP2Q12982 314 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 SKP2Q13309 424 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 TMEM44Q2T9K0 475 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 LIN52Q52LA3 116 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 EIPR1Q53HC9 387 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 TNFAIP8L2Q6P589 184 aaPredicted RBP8.1□□□□□ -1.11
DDX56-211ENST00000479602 IL20RBQ6UXL0 311 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 SZRD1Q7Z422 152 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 MDGA2Q7Z553 956 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 PACS2Q86VP3 889 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 SLC22A16Q86VW1 577 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 KRT73Q86Y46 540 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 PEX5LQ8IYB4 626 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 ZZZ3Q8IYH5 903 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 C10orf111Q8N326 155 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 POU5F2Q8N7G0 328 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 OR2T12Q8NG77 320 aa8.1□□□□□ -1.11
DDX56-211ENST00000479602 LILRB4Q8NHJ6 448 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms