RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 EIF3KQ9UBQ5 218 aaKnown RBP6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 ANAPC7Q9UJX3 599 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 SLC9A8Q9Y2E8 581 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 DLG5Q8TDM6 1919 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 UNC80Q8N2C7 3258 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 IBTKQ9P2D0 1353 aaPredicted RBP6.21□□□□□ -1.41
GAPVD1-217ENST00000479511 SLX4Q8IY92 1834 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 FAM240BA0A1B0GVZ2 78 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 SERTM2A0A1B0GWG4 89 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 H0YC42 278 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 K7ERI5 159 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 PDLIM1O00151 329 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 INPP4BO15327 924 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 CEACAM4O75871 244 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 TBXA2RP21731 343 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 CASP4P49662 377 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 HMGA2P52926 109 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 COX10Q12887 443 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 UBE2V2Q15819 145 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 ARMC12Q5T9G4 340 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 FAM53AQ6NSI3 398 aaPredicted RBP6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 FIP1L1Q6UN15 594 aaKnown RBP6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 SLC26A9Q7LBE3 791 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 TRPM8Q7Z2W7 1104 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 CDR2LQ86X02 465 aaPredicted RBP6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 NECAB1Q8N987 351 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 C17orf47Q8NEP4 570 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 OR9K2Q8NGE7 335 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 M1APQ8TC57 530 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 MYLPFQ96A32 169 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 CNRIP1Q96F85 164 aaPredicted RBP6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 TMEM121Q9BTD3 319 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 GPR174Q9BXC1 333 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 COMMD4Q9H0A8 199 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 MTHFD2LQ9H903 347 aaPredicted RBP6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 SGK2Q9HBY8 427 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 TAS2R16Q9NYV7 291 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 LNPEPQ9UIQ6 1025 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 MEMO1Q9Y316 297 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 MAP3K15Q6ZN16 1313 aa6.21□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF609O15014 1411 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 KIAA0100Q14667 2235 aaKnown RBP6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 IGHV3-20A0A0C4DH32 117 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 P2RY10O00398 339 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 BUB3O43684 328 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 FGF17O60258 216 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 MAGEC1O60732 1142 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 MTRF1O75570 445 aaKnown RBP6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 SLC2A3P11169 496 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 FOSL2P15408 326 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 UCP1P25874 307 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 HPCAL1P37235 193 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 OPRL1P41146 370 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 MAGEA8P43361 318 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 DHODHQ02127 395 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 KNOP1Q1ED39 458 aaKnown RBP6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 TMEM44Q2T9K0 475 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 Q6ZRP5 223 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 ACOT1Q86TX2 421 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 TMEM17Q86X19 198 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 OR4D5Q8NGN0 318 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 TNFRSF13CQ96RJ3 184 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 RNF7Q9UBF6 113 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 SEC14L3Q9UDX4 400 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 RPH3ALQ9UNE2 315 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 PPP1R3CQ9UQK1 317 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 IFT52Q9Y366 437 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 NUP98P52948 1817 aa6.2□□□□□ -1.42
GAPVD1-217ENST00000479511 RIC1Q4ADV7 1423 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 TRBV5-4A0A0C4DH59 114 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 SNTNA6NMZ2 147 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 NBR2O15453 112 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 SRPX2O60687 465 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 DBTP11182 482 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 BDKRB1P46663 353 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 CCT3P49368 545 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF85Q03923 595 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 BNIP1Q12981 228 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 ATXN7L3Q14CW9 347 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 EMC2Q15006 297 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 RBBP5Q15291 538 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 MLF2Q15773 248 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 CCDC6Q16204 474 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 PRAMEF5Q5TYX0 476 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 PRAMEF6Q5VXH4 476 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 BHLHB9Q6PI77 547 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 KCNMB4Q86W47 210 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 RAB42Q8N4Z0 105 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNRF1Q8ND25 227 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 OR10V1Q8NGI7 309 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 SLC2A14Q8TDB8 520 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 BIRC7Q96CA5 298 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 ZNF300Q96RE9 604 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 CDX2Q99626 313 aaPredicted RBP6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 NT5DC2Q9H857 520 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 ZFP14Q9HCL3 533 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 SPATA7Q9P0W8 599 aa6.19□□□□□ -1.42
GAPVD1-217ENST00000479511 SUN2Q9UH99 717 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms