RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RAB40BQ12829 278 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 GAS6Q14393 721 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 EXOSC7Q15024 291 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 CCDC58Q4VC31 144 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 OR8S1Q8NH09 359 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 RLN3Q8WXF3 142 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 QRSL1Q9H0R6 528 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 LMAN1LQ9HAT1 526 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 C19orf25Q9UFG5 118 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 PSORS1C1Q9UIG5 152 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 EDARQ9UNE0 448 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 HMX3A6NHT5 357 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 NDUFB2O95178 105 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 IFNA21P01568 189 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 CTSLP07711 333 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 HTR2AP28223 471 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 EIF2DP41214 584 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 YPEL5P62699 121 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ENTPD8Q5MY95 495 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ABHD17CQ6PCB6 329 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 KLHDC8BQ8IXV7 354 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 OR51L1Q8NGJ5 315 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 NIPSNAP1Q9BPW8 284 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 SGPP1Q9BX95 441 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 COPZ2Q9P299 210 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ATG4BQ9Y4P1 393 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 CXorf51AA0A1B0GTR3 108 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 PXNP49023 591 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 AIMP2Q13155 320 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 LAS2Q8IYD9 372 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ENTHD1Q8IYW4 607 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF101Q8IZC7 436 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 THAP3Q8WTV1 239 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 UBE2FQ969M7 185 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 CNN2Q99439 309 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF700Q9H0M5 742 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 POT1Q9NUX5 634 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 PRKRAO75569 313 aaKnown RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 PPP1R3DO95685 299 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 S100A10P60903 97 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ACTA2P62736 377 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ACTG2P63267 376 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 TMEM69Q5SWH9 247 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 SFRP4Q6FHJ7 346 aaPredicted RBP13.43□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF285Q96NJ3 590 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 TAAR2Q9P1P5 351 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 MED16Q9Y2X0 877 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 TMEM14AQ9Y6G1 99 aa13.43□□□□□ -0.26
COL20A1-206ENST00000479501 A0A1W2PQ09 198 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 CTDSP2O14595 271 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 VNN2O95498 520 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 CD160O95971 181 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FOSL2P15408 326 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 PGCP20142 388 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 KCNJ5P48544 419 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 OC90Q02509 493 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 SNTA1Q13424 505 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 DUSP7Q16829 419 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 PARP16Q8N5Y8 322 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 OR8K3Q8NH51 312 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 MAFIPQ8WZ33 124 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 THSD1Q9NS62 852 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 PLEKHM1Q9Y4G2 1056 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 RGS9O75916 674 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 SEC14L2O76054 403 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 PAHP00439 452 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 SSTR4P31391 388 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FXYD6P3P58550 94 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 EIF4EBP2Q13542 120 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 KCTD18Q6PI47 426 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 THRSPQ92748 146 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 BPIFA2Q96DR5 249 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 GON7Q9BXV9 100 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 A4GALTQ9NPC4 353 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 LTBP1Q14766 1721 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 A8MVJ9 347 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 ETHE1O95571 254 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FUCA1P04066 466 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 ILKQ13418 452 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 AGAP7PQ5VUJ5 663 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FOXB2Q5VYV0 432 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 TMEM151BQ8IW70 566 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 RIMKLAQ8IXN7 391 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 SLC6A17Q9H1V8 727 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 OR52D1Q9H346 318 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FGF22Q9HCT0 170 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 ZNFX1Q9P2E3 1918 aaKnown RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 FAM227AF5H4B4 570 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF20P17024 532 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 PRKCAP17252 672 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 PVALBP20472 110 aaPredicted RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 BCL6P41182 706 aa13.42□□□□□ -0.26
COL20A1-206ENST00000479501 EIF1AXP47813 144 aaKnown RBP13.42□□□□□ -0.26
COL20A1-206ENST00000479501 ZNF41P51814 821 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms