RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 TRAPPC4Q9Y296 219 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 SLC17A4Q9Y2C5 497 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 WDR37Q9Y2I8 494 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 EXOSC1Q9Y3B2 195 aaKnown RBP4.61□□□□□ -1.67
SF3B6-202ENST00000478050 ASB4Q9Y574 426 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 OR1A2Q9Y585 309 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 PCDHGB6Q9Y5F9 930 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 COLEC10Q9Y6Z7 277 aa4.61□□□□□ -1.67
SF3B6-202ENST00000478050 IQCMA0A1B0GVH7 501 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 A0A1W2PR48 441 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM129A0AVI4 362 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 DUXAA6NLW8 204 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 NUDT19A8MXV4 375 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 KDM4EB2RXH2 506 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF670-ZNF695F2Z2N8 137 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 AP3D1O14617 1153 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PLRG1O43660 514 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TLX2O43763 284 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TPST2O60704 377 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ATP6V1G1O75348 118 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ERAL1O75616 437 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 CYP7B1O75881 506 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 UBXN7O94888 489 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PAK4O96013 591 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 IL1AP01583 271 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 HMGN2P05204 90 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 CHRM4P08173 479 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 IGFBP1P08833 259 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ADRA2AP08913 450 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 HOXC4P09017 264 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 NR2F6P10588 404 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ACP2P11117 423 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ALOX12P18054 663 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MYL12AP19105 171 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TNNI3P19429 210 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 CERS1P27544 350 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 GTF2E2P29084 291 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PEBP1P30086 187 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PRKAR1BP31321 381 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MPIP34949 423 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FEN1P39748 380 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 STAT5AP42229 794 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 WASP42768 502 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 CRYBB2P43320 205 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TNFRSF4P43489 277 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TMED10P49755 219 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RORCP51449 518 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PRKAG1P54619 331 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TAS2R41P59536 307 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 KIAA1024LP59773 190 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RPS15AP62244 130 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 EFNB1P98172 346 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RUNX1T1Q06455 604 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RGS1Q08116 209 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FUT5Q11128 374 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ST3GAL3Q11203 375 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RAB40BQ12829 278 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FOXD4Q12950 439 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TSPAN31Q12999 210 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PIN1Q13526 163 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FGL2Q14314 439 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 LRRC32Q14392 662 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 LASP1Q14847 261 aaKnown RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RPE65Q16518 533 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SNAPC1Q16533 368 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ITPRIPL2Q3MIP1 535 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MINDY4Q4G0A6 757 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SYT14P1Q58G82 188 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF311Q5JNZ3 666 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF425Q6IV72 752 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SLC27A4Q6P1M0 643 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 WASH2PQ6VEQ5 465 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 RASSF6Q6ZTQ3 369 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 MTSS1LQ765P7 747 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZER1Q7Z7L7 766 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SNX29P2Q8IUI4 249 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FAM83FQ8NEG4 500 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TOR1AIP2Q8NFQ8 470 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 OR52I1Q8NGK6 324 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 OR6T1Q8NGN1 323 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 OR8K5Q8NH50 307 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 PIGXQ8TBF5 258 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TMEM163Q8TC26 289 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 NT5CQ8TCD5 201 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 GANCQ8TET4 914 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ASB12Q8WXK4 309 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 UCN3Q969E3 161 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 FAM131CQ96AQ9 280 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 EFHD2Q96C19 240 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 TMCO6Q96DC7 493 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 OTUB1Q96FW1 271 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF582Q96NG8 517 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 WDFY2Q96P53 400 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SORCS2Q96PQ0 1159 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 OR2M4Q96R27 311 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 OR7D2Q96RA2 312 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 CDCA3Q99618 268 aaPredicted RBP4.6□□□□□ -1.67
SF3B6-202ENST00000478050 NRTNQ99748 197 aa4.6□□□□□ -1.67
SF3B6-202ENST00000478050 SLC30A2Q9BRI3 323 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms