RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MGAT4BQ9UQ53 548 aa17.88■□□□□ 0.45
PDLIM1-202ENST00000477757 VWC2LB2RUY7 222 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 IFI6P09912 130 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 LINGO3P0C6S8 592 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 COL6A2P12110 1019 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 GGT1P19440 569 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 NTSP30990 170 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 EIF1P41567 113 aaKnown RBP17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 MAGEA4P43358 317 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 SPOCK1Q08629 439 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 FOXF1Q12946 379 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 GLE1Q53GS7 698 aaKnown RBP17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 SLC22A25Q6T423 547 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 TMEM108Q6UXF1 575 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 B3GLCTQ6Y288 498 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 SLC43A2Q8N370 569 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 RFLNBQ8N5W9 214 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 PIK3R3Q92569 461 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 HOXB13Q92826 284 aaPredicted RBP17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 ELP4Q96EB1 424 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 APIPQ96GX9 242 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 SH3YL1Q96HL8 342 aaPredicted RBP17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 EBPLQ9BY08 206 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 GLIPR2Q9H4G4 154 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 COQ10BQ9H8M1 238 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 PRSS50Q9UI38 385 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 ING1Q9UK53 422 aaPredicted RBP17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 POU2F3Q9UKI9 436 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 GRID1Q9ULK0 1009 aa17.87■□□□□ 0.45
PDLIM1-202ENST00000477757 OR5H1A6NKK0 313 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 TCF21O43680 179 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 PGM3O95394 542 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 DHRS4L1P0CG22 281 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 CFPP27918 469 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 ZNF763Q0D2J5 394 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 ZNF544Q6NX49 715 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 MISPQ8IVT2 679 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 OR2W6PQ8NHA6 318 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 MRRFQ96E11 262 aaKnown RBP17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 AMDHD1Q96NU7 426 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 PSD2Q9BQI7 771 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 PRR14Q9BWN1 585 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 CXorf36Q9H7Y0 433 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 TAS2R7Q9NYW3 318 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 KLHL9Q9P2J3 617 aa17.86■□□□□ 0.45
PDLIM1-202ENST00000477757 FAM187AA6NFU0 413 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 GJE1A6NN92 205 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 RGS14O43566 566 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 ANXA4P09525 319 aaPredicted RBP17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 IGHV1-2P23083 117 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 EDNRAP25101 427 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 PTAFRP25105 342 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 MAP3K8P41279 467 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 MAGEA12P43365 314 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 PRIM2P49643 509 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 FABP6P51161 128 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 GGTLC2Q14390 218 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 RASA2Q15283 850 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 TSNAXIP1Q2TAA8 658 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 GPR151Q8TDV0 419 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 ADAM19Q9H013 955 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 EQTNQ9NQ60 294 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 MIEF1Q9NQG6 463 aa17.85■□□□□ 0.45
PDLIM1-202ENST00000477757 A8MT66 165 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 EFNA2O43921 213 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 KIAA0513O60268 411 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 ULK1O75385 1050 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 LY6HO94772 140 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 NKX2-2O95096 273 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 CD40P25942 277 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 HTR6P50406 440 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 UAP1Q16222 522 aaPredicted RBP17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 VPS26BQ4G0F5 336 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 C12orf54Q6X4T0 127 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 B4GALNT2Q8NHY0 566 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 CDC26Q8NHZ8 85 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 ZFP90Q8TF47 636 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 C1orf159Q96HA4 380 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 SIRT5Q9NXA8 310 aa17.84■□□□□ 0.45
PDLIM1-202ENST00000477757 A0A1W2PQD3 144 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 NDUFS8O00217 210 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 BMP4P12644 408 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 APEHP13798 732 aaKnown RBP17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 ITGA2P17301 1181 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 ENPP1P22413 925 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 HSD17B3P37058 310 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 NR4A2P43354 598 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 GUCY2DQ02846 1103 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 CLCQ05315 142 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 C2orf80Q0P641 193 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 CD226Q15762 336 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 ARL13AQ5H913 290 aaPredicted RBP17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 FAM71E1Q6IPT2 247 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 ZAR1Q86SH2 424 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 MMGT1Q8N4V1 131 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 FAM110BQ8TC76 370 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF382Q96SR6 550 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 PIMREGQ9BSJ6 248 aa17.83■□□□□ 0.44
PDLIM1-202ENST00000477757 MRPL46Q9H2W6 279 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms