RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 P2RY2P41231 377 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 TSPAN5P62079 268 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 SNRPNP63162 240 aaKnown RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 DGCR2P98153 550 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 MLLT11Q13015 90 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 BEX5Q5H9J7 111 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 TMEM64Q6YI46 380 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 TMED4Q7Z7H5 227 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 OR5M3Q8NGP4 307 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 FGF13Q92913 245 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 RSPRY1Q96DX4 576 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 PDXPQ96GD0 296 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 SGPP1Q9BX95 441 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 OR52D1Q9H346 318 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 SAGE1Q9NXZ1 904 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 MARK1Q9P0L2 795 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 NFKBIL1Q9UBC1 381 aaPredicted RBP9.11□□□□□ -0.95
CMC1-209ENST00000477739 REV1Q9UBZ9 1251 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 ADAM18Q9Y3Q7 739 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 STON1Q9Y6Q2 735 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 NCOR1O75376 2440 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 GBF1Q92538 1859 aa9.11□□□□□ -0.95
CMC1-209ENST00000477739 TVP23AA6NH52 213 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SLC9B1P1A6NJY1 282 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 PLGP00747 810 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 HPGDP15428 266 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 EPHA5P54756 1037 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SHC2P98077 582 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CRMP1Q14194 572 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 TRAM2Q15035 370 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 XKRXQ6PP77 449 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 TMPRSS9Q7Z410 1059 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 PEX5LQ8IYB4 626 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 LAS2Q8IYD9 372 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 LINC01555Q8NAE3 123 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 C17orf47Q8NEP4 570 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 OR2T33Q8NG76 320 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 OR52E1Q8NGJ3 308 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SETD7Q8WTS6 366 aaKnown RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 AKAP1Q92667 903 aaKnown RBP eCLIP9.1□□□□□ -0.95
CMC1-209ENST00000477739 CD180Q99467 661 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CDCA4Q9BXL8 241 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 MTIF3Q9H2K0 278 aaKnown RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 RPS6KB2Q9UBS0 482 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 ITGB1BP2Q9UKP3 347 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 LIMS3P0CW19 117 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 LIMS4P0CW20 117 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 HOXB9P17482 250 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 GABRB1P18505 474 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 AHCYP23526 432 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 MAOBP27338 520 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 POU6F2P78424 691 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 GPM6BQ13491 265 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 GPR176Q14439 515 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 OAFQ86UD1 273 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SLC38A6Q8IZM9 456 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 RDH10Q8IZV5 341 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 FTMTQ8N4E7 242 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 RFLNBQ8N5W9 214 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 MEIOBQ8N635 442 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 ACBD7Q8N6N7 88 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 ZNF527Q8NB42 609 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SMARCD2Q92925 531 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 EFHD2Q96C19 240 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 FCRL1Q96LA6 429 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 DERL3Q96Q80 235 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SPATA5L1Q9BVQ7 753 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 MS4A8Q9BY19 250 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 PHPT1Q9NRX4 125 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 TMEM5Q9Y2B1 443 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SIRT4Q9Y6E7 314 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 A0A1B0GTH9 108 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CXorf51AA0A1B0GTR3 108 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CDC14CA4D256 554 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 C4orf47A7E2U8 309 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CENPBD1B2RD01 187 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 NPIPB8E9PQR5 432 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CACNB4O00305 520 aaPredicted RBP9.1□□□□□ -0.95
CMC1-209ENST00000477739 SOD1P00441 154 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 ZNF250P15622 560 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CDK3Q00526 305 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CDC20Q12834 499 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 LNX2Q8N448 690 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 TBC1D19Q8N5T2 526 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 TMIEQ8NEW7 156 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 OR7G1Q8NGA0 311 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 NEURL3Q96EH8 262 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 OR14A2Q96R54 314 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SEC22CQ9BRL7 303 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 ULBP3Q9BZM4 244 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 SRMSQ9H3Y6 488 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 EPHX3Q9H6B9 360 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 TAS2R7Q9NYW3 318 aa9.1□□□□□ -0.95
CMC1-209ENST00000477739 CNOT2Q9NZN8 540 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms