RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	POMT1	Q9Y6A1	747 aa		4.4	□□□□□ -1.71
PTCD3-212	ENST00000477520		V9GYQ6	96 aa		4.4	□□□□□ -1.71
PTCD3-212	ENST00000477520	PDE4DIP	Q5VU43	2346 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TRAV19	A0A0A6YYK7	116 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	LOC102723532	A0A0G2JNH3	316 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SMIM35	A0A1B0GVV1	85 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC12A8	A0AV02	714 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	UBE2QL1	A1L167	161 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	LCHN	A4D1U4	455 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	METTL21EP	A6NDL7	271 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	MYADML2	A6NDP7	307 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	FAM74A7	A6NL05	159 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ANXA2P2	A6NMY6	339 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZAR1L	A6NP61	321 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	STMND1	H3BQB6	276 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SMLR1	H3BR10	107 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520		M0QYV0	167 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520		M0QZ92	97 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520		M0QZK8	103 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TCAP	O15273	167 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF749	O43361	778 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	VEGFD	O43915	354 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NDUFS6	O75380	124 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	POP7	O75817	140 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	RECQL4	O94761	1208 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	KDM4B	O94953	1096 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	UBL3	O95164	117 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	OAZ2	O95190	189 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NFATC1	O95644	943 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	RAB36	O95755	333 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	GLP2R	O95838	553 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TF	P02787	698 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CRYBA1	P05813	215 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	GP1BA	P07359	652 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	LINC00032	P0C843	101 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SPP1	P10451	314 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	DAO	P14920	347 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CSF2RA	P15509	400 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	FAH	P16930	419 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	BPI	P17213	487 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ARF4	P18085	180 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPX2	P18283	190 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ANXA7	P20073	488 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NPR2	P20594	1047 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	MAK	P20794	623 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	AGA	P20933	346 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SAT1	P21673	171 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	PTPN3	P26045	913 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NMBR	P28336	390 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CTNNB1	P35222	781 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CDKN2C	P42773	168 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	PTGFR	P43088	359 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	HTR5A	P47898	357 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	MTNR1B	P49286	362 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	RRAD	P55042	308 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	DIO3	P55073	304 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CTBP2	P56545	445 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SMIM11A	P58511	58 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	MTPN	P58546	118 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC26A5	P58743	744 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	MAT1A	Q00266	395 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TNFRSF17	Q02223	184 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	DSC2	Q02487	901 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	IL10RB	Q08334	325 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CNTN1	Q12860	1018 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	FOXL1	Q12952	345 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	GAGE1	Q13065	139 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TUSC3	Q13454	348 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF345	Q14585	488 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	KIAA0040	Q15053	153 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TBR1	Q16650	682 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	UGCG	Q16739	394 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NDUFA9	Q16795	377 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	EXOC3L2	Q2M3D2	409 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	FAM74A3	Q4VXF1	159 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CARD16	Q5EG05	197 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	HECTD2	Q5U5R9	776 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	RAET1G	Q6H3X3	334 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	NCEH1	Q6PIU2	408 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	VIT	Q6UXI7	678 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	LRRN1	Q6UXK5	716 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SLC39A5	Q6ZMH5	540 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	IL34	Q6ZMJ4	242 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	QSOX2	Q6ZRP7	698 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	PTCHD4	Q6ZW05	846 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TMUB2	Q71RG4	321 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	KANSL1	Q7Z3B3	1105 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	PEG10	Q86TG7	708 aa	Known RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	SERINC5	Q86VE9	423 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	ZNF227	Q86WZ6	799 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	HS3ST5	Q8IZT8	346 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CRYBG2	Q8N1P7	616 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	FBXO39	Q8N4B4	442 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	TOMM5	Q8N4H5	51 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	CCNY	Q8ND76	341 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	DNAAF1	Q8NEP3	725 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR6C4	Q8NGE1	309 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	OR8J1	Q8NGP2	316 aa		4.39	□□□□□ -1.71
PTCD3-212	ENST00000477520	GPR150	Q8NGU9	434 aa		4.39	□□□□□ -1.71

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