RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MAPK14Q16539 360 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 PRSS53Q2L4Q9 553 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 PGGHGQ32M88 737 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 APCDD1Q8J025 514 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 ACBD7Q8N6N7 88 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 SMPDL3AQ92484 453 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 ELP4Q96EB1 424 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 GIMAP5Q96F15 307 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 TREX2Q9BQ50 279 aaPredicted RBP14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 RSPO3Q9BXY4 272 aaPredicted RBP14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 MS4A7Q9GZW8 240 aaPredicted RBP14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 FBXL3Q9UKT7 428 aa14.24□□□□□ -0.13
CLSTN1-205ENST00000477264 D6RAR5 112 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 J3QRE1 110 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 DNASE2O00115 360 aaPredicted RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 SELENOFO60613 162 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 GALR3O60755 368 aaPredicted RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 KLHL18O94889 574 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 OR2A4O95047 310 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 KLK1P06870 262 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 C1GALT1C1LP0DN25 315 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 NAT2P11245 290 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 IFNGR1P15260 489 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 PSMB1P20618 241 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 SHC1P29353 583 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 ANXA11P50995 505 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 RPS26P62854 115 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 KRT33BQ14525 404 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 SERPINA13PQ6UXR4 307 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 C6orf120Q7Z4R8 191 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 CAMKVQ8NCB2 501 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 OR51Q1Q8NH59 317 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 PIGXQ8TBF5 258 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 SORCS1Q8WY21 1168 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 TIFAQ96CG3 184 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 OR2A7Q96R45 310 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 C1QTNF6Q9BXI9 259 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 MFRPQ9BY79 579 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 ABCG4Q9H172 646 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 TDP1Q9NUW8 608 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 AHSPQ9NZD4 102 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 NDRG3Q9UGV2 375 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 OR2M5A3KFT3 312 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 SNRPGP15A8MWD9 76 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 NRG2O14511 850 aaPredicted RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 SC5DO75845 299 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 GBAP04062 536 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 WNT1P04628 370 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 IL5P05113 134 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 POU2F2P09086 479 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 CCR9P51686 369 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 MANFP55145 182 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 MAZP56270 477 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 FZD5Q13467 585 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 GNA13Q14344 377 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 HLXQ14774 488 aaPredicted RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 TRAM2Q15035 370 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 PXKQ7Z7A4 578 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 STPG2Q8N412 459 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 COQ8AQ8NI60 647 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 TMEM159Q96B96 161 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 UTP23Q9BRU9 249 aaKnown RBP14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 ALG8Q9BVK2 526 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 BCL2L10Q9HD36 194 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 PIPOXQ9P0Z9 390 aa14.23□□□□□ -0.13
CLSTN1-205ENST00000477264 LAMA3Q16787 3333 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 TRAV1-2A0A0B4J238 106 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 K7ERQ8 282 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 PLPP2O43688 288 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 SUSD5O60279 629 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 RGS11O94810 467 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 SLC16A8O95907 504 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 GABRA1P14867 456 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 RAB3BP20337 219 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 PAICSP22234 425 aaKnown RBP14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 FPR3P25089 353 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 FRKP42685 505 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 SPINT3P49223 89 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 NTHL1P78549 312 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 PABPC1L2AQ5JQF8 200 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 GLDNQ6ZMI3 551 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 SLC44A3Q8N4M1 653 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 RAB8BQ92930 207 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 PINK1Q9BXM7 581 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 DNTTIP1Q9H147 329 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 MRPS23Q9Y3D9 190 aaKnown RBP14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 ATG2AQ2TAZ0 1938 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 A0A087WUU8 490 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 ARPC4-TTLL3A0A0A6YYG9 625 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 A0A1B0GTQ1 180 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 SYT5O00445 386 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 SIGLEC6O43699 453 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 CREBL2O60519 120 aaPredicted RBP14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 MOSPD3O75425 235 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 REM1O75628 298 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 TGFB1P01137 390 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 TRIM23P36406 574 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 GDNFP39905 211 aa14.22□□□□□ -0.13
CLSTN1-205ENST00000477264 PTSQ03393 145 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms