RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TBL1XR1Q9BZK7 514 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 OR10A4Q9H209 315 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 FAM120CQ9NX05 1096 aaKnown RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 MCTS1Q9ULC4 181 aaKnown RBP6.54□□□□□ -1.36
BRCA1-214ENST00000477152 DTX4Q9Y2E6 619 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 CELSR1Q9NYQ6 3014 aa6.54□□□□□ -1.36
BRCA1-214ENST00000477152 CSMD1Q96PZ7 3565 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 A0A087WZY1 265 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TNFSF13O75888 250 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SOX30O94993 753 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 OR4F21O95013 312 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 HSPA4LO95757 839 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 GSTA1P08263 222 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 IL3P08700 152 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 HPGDP15428 266 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ME2P23368 584 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ATP5F1P24539 256 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CD40P25942 277 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TIA1P31483 386 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 UGT2B10P36537 528 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 HSD17B3P37058 310 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 MAGEA12P43365 314 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 STARP49675 285 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF763Q0D2J5 394 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 GLE1Q53GS7 698 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 BEX5Q5H9J7 111 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SPDYAQ5MJ70 313 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SH2D4BQ5SQS7 431 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ZDHHC24Q6UX98 284 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SSX8Q7RTT4 187 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 YTHDF3Q7Z739 585 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 UBQLNLQ8IYU4 475 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CDYL2Q8N8U2 506 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CEP70Q8NHQ1 597 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 STARD4Q96DR4 205 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 METTL2AQ96IZ6 378 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 VSTM2LQ96N03 204 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF681Q96N22 645 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 PINK1Q9BXM7 581 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 DSN1Q9H410 356 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ZBTB26Q9HCK0 441 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TIGARQ9NQ88 270 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 DDX18Q9NVP1 670 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 MKS1Q9NXB0 559 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 NINJ2Q9NZG7 142 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 EXOC1LA0A1B0GW35 172 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF503-AS2A6NEH8 195 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 A8MT66 165 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 KDM4EB2RXH2 506 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TRIM49D1C9J1S8 452 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 H3BML4 177 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SCO2O43819 266 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 LPLP06858 475 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ANXA4P09525 319 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CT45A8P0DMV1 189 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CT45A9P0DMV2 189 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ZNF17P17021 662 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 DDCP20711 480 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 IMPDH1P20839 514 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 LCN1P31025 176 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 NCBP2P52298 156 aaKnown RBP eCLIP6.53□□□□□ -1.365e-10■■■■■ 33.9
BRCA1-214ENST00000477152 CDH13P55290 713 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SIRPAP78324 504 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 C2orf80Q0P641 193 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 LCP2Q13094 533 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 LTB4RQ15722 352 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ETFDHQ16134 617 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 WHAMMP3Q1A5X7 153 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CT45A2Q5DJT8 189 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TCHHL1Q5QJ38 904 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 PPP4R4Q6NUP7 873 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CD300LDQ6UXZ3 194 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 FRMD7Q6ZUT3 714 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 IKBIPQ70UQ0 350 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ATG4DQ86TL0 474 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 CXorf67Q86X51 503 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 MISPQ8IVT2 679 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 OR9A2Q8NGT5 310 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 OR6K3Q8NGY3 331 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 ACMSDQ8TDX5 336 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 C16orf78Q8WTQ4 265 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 KAT2AQ92830 837 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TRMT61AQ96FX7 289 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 GMPPAQ96IJ6 420 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 Q96MF0 132 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 WFIKKN1Q96NZ8 548 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 TACO1Q9BSH4 297 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 HDHD5Q9BXW7 423 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 KLHL4Q9C0H6 718 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 RRAGDQ9NQL2 400 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 FARSBQ9NSD9 589 aaKnown RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 SIRT5Q9NXA8 310 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 KLHL28Q9NXS3 571 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 C6orf203Q9P0P8 240 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-214ENST00000477152 DCDC2Q9UHG0 476 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 FBXL2Q9UKC9 423 aa6.53□□□□□ -1.36
BRCA1-214ENST00000477152 KIAA1549Q9HCM3 1950 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms