RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 GIN1Q9NXP7 522 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 KCNE5Q9UJ90 142 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ING1Q9UK53 422 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 EIF3LQ9Y262 564 aaKnown RBP6.27□□□□□ -1.41
HDAC3-207ENST00000475549 EXPH5Q8NEV8 1989 aa6.27□□□□□ -1.41
HDAC3-207ENST00000475549 ARHGAP21Q5T5U3 1957 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 CENPVL1A0A0U1RR11 272 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 A0A1W2PQD3 144 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF195O14628 629 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ITM2AO43736 263 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 TYROBPO43914 113 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 NPHS1O60500 1241 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 FCMRO60667 390 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 SMPD2O60906 423 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 BCAS1O75363 584 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 GCM2O75603 506 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 C6orf47O95873 294 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 C1QCP02747 245 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 NUDT17P0C025 328 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 G6PDP11413 515 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 NEFHP12036 1026 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 FCGR2AP12318 317 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ENPP1P22413 925 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 EDNRAP25101 427 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 LCN1P31025 176 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ETV4P43268 484 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ASMTP46597 345 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 SERPINB4P48594 390 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 CARD18P57730 90 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 VSNL1P62760 191 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 RPS26P62854 115 aaKnown RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 HBA1P69905 142 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 POU6F2P78424 691 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF844Q08AG5 666 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 FOXF1Q12946 379 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 TSC22D1Q15714 1073 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 IL23RQ5VWK5 629 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 SHEQ5VZ18 495 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 HBMQ6B0K9 141 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 SEZ6L2Q6UXD5 910 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 NUFIP2Q7Z417 695 aaKnown RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 SZRD1Q7Z422 152 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ATG4DQ86TL0 474 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 TUSC5Q8IXB3 177 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 DDIASQ8IXT1 998 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 CNPY4Q8N129 248 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 CLEC4FQ8N1N0 589 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 COX18Q8N8Q8 333 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 OR2V1Q8NHB1 315 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 B4GALNT2Q8NHY0 566 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ZFP28Q8NHY6 868 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 FBXO27Q8NI29 283 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 GPR119Q8TDV5 335 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 ABHD3Q8WU67 409 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 JADE3Q92613 823 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 PIGTQ969N2 578 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 COX4I2Q96KJ9 171 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 KLHL15Q96M94 604 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 Q96MF0 132 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 TMEM204Q9BSN7 226 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 C20orf27Q9GZN8 174 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 UBTD1Q9HAC8 227 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 DUSP22Q9NRW4 184 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 LGALS13Q9UHV8 139 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 MCTS1Q9ULC4 181 aaKnown RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 CARD8Q9Y2G2 431 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 SNX8Q9Y5X2 465 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 NSD1Q96L73 2696 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-207ENST00000475549 DOCK7Q96N67 2140 aa6.26□□□□□ -1.41
HDAC3-207ENST00000475549 FN1P02751 2386 aaKnown RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ABCA2Q9BZC7 2435 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF814B7Z6K7 855 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 H7C1Q1 480 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ETV2O00321 342 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 SCDO00767 359 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 DNAJA2O60884 412 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 SCN2BO60939 215 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 LYPLA1O75608 230 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 CHEK2O96017 543 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PLGP00747 810 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 BPGMP07738 259 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PAX1P15863 534 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PRKCAP17252 672 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ADH6P28332 368 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 AGTR1P30556 359 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ADSLP30566 484 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 SFTPDP35247 375 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF41P51814 821 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PHC1P78364 1004 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 MPP2Q14168 576 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 FGFBP1Q14512 234 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF239Q16600 458 aaKnown RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 TMEM176BQ3YBM2 270 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-207ENST00000475549 DCST2Q5T1A1 773 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PPP4R4Q6NUP7 873 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 CDC73Q6P1J9 531 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 PRSS57Q6UWY2 283 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 CLEC9AQ6UXN8 241 aa6.25□□□□□ -1.41
HDAC3-207ENST00000475549 R3HCC1LQ7Z5L2 792 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms