RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 AMDHD1Q96NU7 426 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 MYNNQ9NPC7 610 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 UBQLN4Q9NRR5 601 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 CBLN4Q9NTU7 201 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 MGAT4BQ9UQ53 548 aa11.18□□□□□ -0.62
SKA3-206ENST00000475251 A0A096LNT2 108 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 GXYLT2A0PJZ3 443 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 SERTM1A2A2V5 107 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 SHISA9B4DS77 424 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 ABCD4O14678 606 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 NKX2-2O95096 273 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 BMP4P12644 408 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 SRD5A1P18405 259 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 GPC1P35052 558 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 SFTPDP35247 375 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 SERPINB4P48594 390 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 PKNOX1P55347 436 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 PRSS12P56730 875 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 C2orf54Q08AI8 447 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 LCP2Q13094 533 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 RAB35Q15286 201 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 STK11Q15831 433 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 IMPG1Q17R60 797 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 TIMM23BQ5SRD1 257 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 ZNF678Q5SXM1 525 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 TEX35Q5T0J7 233 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 FAM71E1Q6IPT2 247 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 NUFIP2Q7Z417 695 aaKnown RBP11.17□□□□□ -0.62
SKA3-206ENST00000475251 OR4C3Q8NH37 302 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 B4GALNT2Q8NHY0 566 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 FAM76AQ8TAV0 307 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 FAM168AQ92567 244 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 PROX1Q92786 737 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 CACNG6Q9BXT2 260 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 EQTNQ9NQ60 294 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 POU2F3Q9UKI9 436 aa11.17□□□□□ -0.62
SKA3-206ENST00000475251 A0A1W2PQD3 144 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 RAMP1O60894 148 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 IGKV1D-16P01601 117 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 GGT1P19440 569 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 HNF1AP20823 631 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 TTKP33981 857 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 OR3A2P47893 321 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 MANFP55145 182 aaKnown RBP11.16□□□□□ -0.62
SKA3-206ENST00000475251 C21orf58P58505 322 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 SEZ6L2Q6UXD5 910 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 TMEM108Q6UXF1 575 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
SKA3-206ENST00000475251 ATG4DQ86TL0 474 aaPredicted RBP11.16□□□□□ -0.62
SKA3-206ENST00000475251 SLC22A9Q8IVM8 553 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 FBXL14Q8N1E6 418 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 GATSQ8NAP1 163 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 ZFP28Q8NHY6 868 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 POC1BQ8TC44 478 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 HOXB13Q92826 284 aaPredicted RBP11.16□□□□□ -0.62
SKA3-206ENST00000475251 ARL8AQ96BM9 186 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 SH3YL1Q96HL8 342 aaPredicted RBP11.16□□□□□ -0.62
SKA3-206ENST00000475251 PAFAH2Q99487 392 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 DHRS9Q9BPW9 319 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 BCO1Q9HAY6 547 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 KCNS2Q9ULS6 477 aa11.16□□□□□ -0.62
SKA3-206ENST00000475251 GOLGA8QA0A0J9YX86 632 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 GOLGA8OA6NCC3 632 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 GOLGA8NF8WBI6 632 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 GOLGA8RI6L899 631 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 RGS14O43566 566 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 LMX1BO60663 402 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 LYZL6O75951 148 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 NUDT14O95848 222 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 SBK3P0C264 359 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 LINGO3P0C6S8 592 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 DHRS4L1P0CG22 281 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 IMPDH1P20839 514 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 PTAFRP25105 342 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 MAP3K8P41279 467 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 GZMKP49863 264 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 HTR6P50406 440 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 SUMO3P55854 103 aaPredicted RBP11.15□□□□□ -0.62
SKA3-206ENST00000475251 IRX1P78414 480 aaPredicted RBP11.15□□□□□ -0.62
SKA3-206ENST00000475251 FOXF1Q12946 379 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 HSPB3Q12988 150 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 UNC50Q53HI1 259 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 ARL13AQ5H913 290 aaPredicted RBP11.15□□□□□ -0.62
SKA3-206ENST00000475251 LIPNQ5VXI9 398 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 ZCCHC12Q6PEW1 402 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 KLHL17Q6TDP4 642 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 Q6ZSR9 355 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 SZRD1Q7Z422 152 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 LCA5Q86VQ0 697 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 RELL1Q8IUW5 271 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 MUC15Q8N387 334 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 TMEM151AQ8N4L1 468 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 OR2W6PQ8NHA6 318 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.15□□□□□ -0.62
SKA3-206ENST00000475251 ZFP90Q8TF47 636 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 MS4A4EQ96PG1 132 aa11.15□□□□□ -0.62
SKA3-206ENST00000475251 TMEM237Q96Q45 408 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms