RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 OR5R1Q8NH85 324 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SLC7A13Q8TCU3 470 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ACOT11Q8WXI4 607 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 SMPDL3BQ92485 455 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 HMCESQ96FZ2 354 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PCED1BQ96HM7 432 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ZFYVE19Q96K21 471 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SPATA17Q96L03 361 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 YPEL2Q96QA6 119 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 DPH2Q9BQC3 489 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 PRSS27Q9BQR3 290 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ULBP1Q9BZM6 244 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 UBE2ZQ9H832 354 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 FN3KRPQ9HA64 309 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SLAMF7Q9NQ25 335 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ZDHHC8Q9ULC8 765 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ST3GAL5Q9UNP4 418 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ANKRD12Q6UB98 2062 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MCIDASD6RGH6 385 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SLC31A2O15432 143 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 EFCAB14O75071 495 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SRSF10O75494 262 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 AKR7A3O95154 331 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 OAZ2O95190 189 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 IFNA10P01566 189 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 UBBP0CG47 229 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 UBCP0CG48 685 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 HPGDP15428 266 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 GNSP15586 552 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 S100PP25815 95 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PCSK1P29120 753 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 BLVRAP53004 296 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 RPS15P62841 145 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 RPS27AP62979 156 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 UBA52P62987 128 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 TRAM1Q15629 374 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 UPP1Q16831 310 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 IFI44LQ53G44 452 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PYY3Q5JQD4 70 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FBXO47Q5MNV8 452 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 LIPKQ5VXJ0 399 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CDPF1Q6NVV7 123 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 CATSPERDQ86XM0 798 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SLC34A3Q8N130 599 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ATG16L2Q8NAA4 619 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PXT1Q8NFP0 134 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 OR4D9Q8NGE8 314 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PIGXQ8TBF5 258 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SLC2A12Q8TD20 617 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CSGALNACT1Q8TDX6 532 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FAM162AQ96A26 154 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 NARS2Q96I59 477 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 TSNAXQ99598 290 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 TREX2Q9BQ50 279 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 SOX7Q9BT81 388 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TPT1P8Q9HAU6 139 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MBD1Q9UIS9 605 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 SSR3Q9UNL2 185 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TMEM5Q9Y2B1 443 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 POMT1Q9Y6A1 747 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TSPAN11A1L157 253 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR14I1A6ND48 311 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 FOXI3A8MTJ6 420 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 MAGEB17A8MXT2 336 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 GPR37L1O60883 481 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 RGS9O75916 674 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 UBXN7O94888 489 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SLC16A8O95907 504 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 LAMP1P11279 417 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 GIFP27352 417 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NDUFS1P28331 727 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TEAD1P28347 426 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CD34P28906 385 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SOX11P35716 441 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 AVPR1BP47901 424 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 NPBWR1P48145 328 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 GIPRP48546 466 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SRP9P49458 86 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 CCR8P51685 355 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 RAP1AP62834 184 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TDGQ13569 410 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TRAM2Q15035 370 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF630Q2M218 657 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF792Q3KQV3 632 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 UNQ6494/PRO21346Q6UXR6 183 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PLEKHH3Q7Z736 793 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF429Q86V71 674 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 CHST14Q8NCH0 376 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR10Q1Q8NGQ4 319 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR5AK2Q8NH90 309 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 MOSPD2Q8NHP6 518 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 METTL6Q8TCB7 284 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PHOSPHO1Q8TCT1 267 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 IGSF8Q969P0 613 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ARL5BQ96KC2 179 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 FERD3LQ96RJ6 166 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PRRG3Q9BZD7 231 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 POLR2J2Q9GZM3 115 aaKnown RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 POLR2J3Q9H1A7 115 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms