RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 OR1L3Q8NH93 324 aa20.11■□□□□ 0.81
CCM2-206ENST00000474617 DYNC2LI1Q8TCX1 351 aa20.11■□□□□ 0.81
CCM2-206ENST00000474617 DAZLQ92904 295 aaKnown RBP20.11■□□□□ 0.81
CCM2-206ENST00000474617 LRFN5Q96NI6 719 aa20.11■□□□□ 0.81
CCM2-206ENST00000474617 DACH2Q96NX9 599 aa20.11■□□□□ 0.81
CCM2-206ENST00000474617 WDR12Q9GZL7 423 aaKnown RBP20.11■□□□□ 0.81
CCM2-206ENST00000474617 HMG20AQ9NP66 347 aa20.11■□□□□ 0.81
CCM2-206ENST00000474617 SIDT1Q9NXL6 827 aaKnown RBP20.11■□□□□ 0.81
CCM2-206ENST00000474617 SEC14L4Q9UDX3 406 aa20.11■□□□□ 0.81
CCM2-206ENST00000474617 TMEM129A0AVI4 362 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 MYL12BO14950 172 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 SURF4O15260 269 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 HCN1O60741 890 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 CSF2RBP32927 897 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 PGDP52209 483 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 DMWDQ09019 674 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 SPHARQ15513 63 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 NXNL2Q5VZ03 156 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 KANSL1Q7Z3B3 1105 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 AMER2Q8N7J2 671 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 NANOGP1Q8N7R0 232 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 BCORP1Q8N888 145 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 ANKK1Q8NFD2 765 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 OR8D4Q8NGM9 314 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 NAT6Q93015 286 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 SENP5Q96HI0 755 aaPredicted RBP20.1■□□□□ 0.81
CCM2-206ENST00000474617 SLC19A3Q9BZV2 496 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 EXOSC3Q9NQT5 275 aaKnown RBP20.1■□□□□ 0.81
CCM2-206ENST00000474617 RPS6KB2Q9UBS0 482 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 PILRBQ9UKJ0 227 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 LSM2Q9Y333 95 aaKnown RBP20.1■□□□□ 0.81
CCM2-206ENST00000474617 TMEM184BQ9Y519 407 aaPredicted RBP20.1■□□□□ 0.81
CCM2-206ENST00000474617 CLCA3PQ9Y6N3 262 aa20.1■□□□□ 0.81
CCM2-206ENST00000474617 TCRBV16S1A1N1A0A5B0 115 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 FRG2CA6NGY1 282 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 SERINC4A6NH21 518 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 OR6C76A6NM76 312 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 PRG2P13727 222 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 ALAS2P22557 587 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 ACAA2P42765 397 aaKnown RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 MTNR1AP48039 350 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 SEPHS1P49903 392 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 SLC37A1P57057 533 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 CFHR1Q03591 330 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 MLLT11Q13015 90 aaPredicted RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 ERV3-1Q14264 604 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 MED22Q15528 200 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 PRPF38BQ5VTL8 546 aaKnown RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 PEAR1Q5VY43 1037 aaPredicted RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 ADCK1Q86TW2 530 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 SLCO6A1Q86UG4 719 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 TMEM151BQ8IW70 566 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 FANK1Q8TC84 345 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 PTPMT1Q8WUK0 201 aaPredicted RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 CNOT9Q92600 299 aaKnown RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 ZNF501Q96CX3 271 aaPredicted RBP20.09■□□□□ 0.81
CCM2-206ENST00000474617 BPIFA2Q96DR5 249 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 JAM3Q9BX67 310 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 TGIF2Q9GZN2 237 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 FBXO8Q9NRD0 319 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 UBQLN4Q9NRR5 601 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 B3GNT3Q9Y2A9 372 aa20.09■□□□□ 0.81
CCM2-206ENST00000474617 FAM86C2PA6NEL3 165 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 PPM1BO75688 479 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 IL33O95760 270 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 IGKV1D-16P01601 117 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 GKN3PP0CG01 181 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 IFI30P13284 250 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 TDGF1P13385 188 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 GPR4P46093 362 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 COPZ1P61923 177 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 KCNAB1Q14722 419 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 SLC34A3Q8N130 599 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 DOK4Q8TEW6 326 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 CCDC74AQ96AQ1 378 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 TAPBPLQ9BX59 468 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 DSN1Q9H410 356 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 FGF21Q9NSA1 209 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 CCDC59Q9P031 241 aaKnown RBP20.08■□□□□ 0.81
CCM2-206ENST00000474617 H2AFY2Q9P0M6 372 aaPredicted RBP20.08■□□□□ 0.81
CCM2-206ENST00000474617 OSGIN1Q9UJX0 560 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 NTNG1Q9Y2I2 539 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 PCDHGA3Q9Y5H0 932 aa20.08■□□□□ 0.81
CCM2-206ENST00000474617 NUP210LQ5VU65 1888 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 A0A1B0GWA3 101 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 CLPSP04118 112 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 IGKV3-11P04433 115 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 HTR1FP30939 366 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 VBP1P61758 197 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 LSM11P83369 360 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCM2-206ENST00000474617 ZXDAP98168 799 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 BNC1Q01954 994 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 ZNF846Q147U1 533 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 KLHL26Q53HC5 615 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 AADACL4Q5VUY2 407 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 LINC00114Q6XXX2 140 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 ZAR1Q86SH2 424 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 SHISA5Q8N114 240 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 LNX2Q8N448 690 aa20.07■□□□□ 0.8
CCM2-206ENST00000474617 Q8N9G6 341 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms