RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 DNASE1P24855 282 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 EIF1AXP47813 144 aaKnown RBP16.64■□□□□ 0.25
COL7A1-209ENST00000474432 OR4F3Q6IEY1 312 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 FAM214BQ7L5A3 538 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 WDR75Q8IWA0 830 aaKnown RBP16.64■□□□□ 0.25
COL7A1-209ENST00000474432 CLEC4FQ8N1N0 589 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 OR5D16Q8NGK9 328 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 ADAMTS15Q8TE58 950 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 MARK4Q96L34 752 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 OR7D2Q96RA2 312 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 PRPF18Q99633 342 aaKnown RBP16.64■□□□□ 0.25
COL7A1-209ENST00000474432 HHATLQ9HCP6 504 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 NEUROD4Q9HD90 331 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 NOP53Q9NZM5 478 aaKnown RBP16.64■□□□□ 0.25
COL7A1-209ENST00000474432 KCNE5Q9UJ90 142 aa16.64■□□□□ 0.25
COL7A1-209ENST00000474432 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-209ENST00000474432 FLNAP21333 2647 aaKnown RBP16.64■□□□□ 0.25
COL7A1-209ENST00000474432 ZFHX3Q15911 3703 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 DEFB108AA8MXU0 73 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 TM9SF1O15321 606 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 CXCL13O43927 109 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 RAF1P04049 648 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 UGT2B10P36537 528 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 ATP12AP54707 1039 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 RPS26P62854 115 aaKnown RBP16.63■□□□□ 0.25
COL7A1-209ENST00000474432 MAD2L1Q13257 205 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-209ENST00000474432 TOMM34Q15785 309 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-209ENST00000474432 SGCBQ16585 318 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 NDUFAF6Q330K2 333 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 SPDYE7PQ495Y7 208 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 MTERF4Q7Z6M4 381 aaKnown RBP16.63■□□□□ 0.25
COL7A1-209ENST00000474432 TGIF2LYQ8IUE0 185 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 OR2V1Q8NHB1 315 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 PPP1R14CQ8TAE6 165 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 MOAP1Q96BY2 351 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 CHMP6Q96FZ7 201 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 ALPK1Q96QP1 1244 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 SDF2Q99470 211 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 TMEM185BQ9H7F4 350 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 KLHL28Q9NXS3 571 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 ELOVL5Q9NYP7 299 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 CLEC4AQ9UMR7 237 aa16.63■□□□□ 0.25
COL7A1-209ENST00000474432 FAF1Q9UNN5 650 aaPredicted RBP16.63■□□□□ 0.25
COL7A1-209ENST00000474432 ESPNB1AK53 854 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 TNFSF11O14788 317 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 SS18L1O75177 396 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-209ENST00000474432 HPGDP15428 266 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 BGNP21810 368 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 LOXP28300 417 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-209ENST00000474432 SLC1A6P48664 564 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 RPL14P50914 215 aaKnown RBP16.62■□□□□ 0.25
COL7A1-209ENST00000474432 ZNF41P51814 821 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-209ENST00000474432 RIPPLY3P57055 190 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 FOXF1Q12946 379 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 PGS1Q32NB8 556 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 ESPNLQ6ZVH7 1005 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 OLIG3Q7RTU3 272 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 C6orf120Q7Z4R8 191 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 CHDHQ8NE62 594 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-209ENST00000474432 OR8J2Q8NGG1 315 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 PHOSPHO1Q8TCT1 267 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 GPR119Q8TDV5 335 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 HOXD1Q9GZZ0 328 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 PLSCR4Q9NRQ2 329 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 C6orf203Q9P0P8 240 aaPredicted RBP16.62■□□□□ 0.25
COL7A1-209ENST00000474432 NDRG3Q9UGV2 375 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 CARD8Q9Y2G2 431 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 ACTL7BQ9Y614 415 aa16.62■□□□□ 0.25
COL7A1-209ENST00000474432 FREM1Q5H8C1 2179 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 RAI1Q7Z5J4 1906 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-209ENST00000474432 CENPVL1A0A0U1RR11 272 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 RNASET2O00584 256 aaKnown RBP16.61■□□□□ 0.25
COL7A1-209ENST00000474432 CFLARO15519 480 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 NTN1O95631 604 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 C1QCP02747 245 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 KRT16P08779 473 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 MYZAPP0CAP1 466 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 FCGR2AP12318 317 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 POU2F1P14859 743 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 CD53P19397 219 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 ATP6V1C1P21283 382 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 P2RX1P51575 399 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 FGFBP1Q14512 234 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 CEP85LQ5SZL2 805 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 FBXW10Q5XX13 1052 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 ZNF550Q7Z398 422 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 LILRA2Q8N149 483 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 GMPPAQ96IJ6 420 aaPredicted RBP16.61■□□□□ 0.25
COL7A1-209ENST00000474432 PNPOQ9NVS9 261 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 PROCRQ9UNN8 238 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 DTNAQ9Y4J8 743 aa16.61■□□□□ 0.25
COL7A1-209ENST00000474432 VPS13CQ709C8 3753 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 ETV2O00321 342 aaPredicted RBP16.6■□□□□ 0.25
COL7A1-209ENST00000474432 FCMRO60667 390 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 DNAJA2O60884 412 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 SOX30O94993 753 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 CD99P14209 185 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 PRKCAP17252 672 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 KLK2P20151 261 aa16.6■□□□□ 0.25
COL7A1-209ENST00000474432 CRYGSP22914 178 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms