RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SLC38A4Q969I6 547 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 ZG16BQ96DA0 208 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 SH3YL1Q96HL8 342 aaPredicted RBP9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 SGCZQ96LD1 299 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 DCBLD2Q96PD2 775 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 SECISBP2Q96T21 854 aaKnown RBP9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 OSBPL10Q9BXB5 764 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 ING2Q9H160 280 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 Q9H521 79 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 PTGES2Q9H7Z7 377 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 TIMMDC1Q9NPL8 285 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 EXOSC3Q9NQT5 275 aaKnown RBP9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 STMN3Q9NZ72 180 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 CNIH4Q9P003 139 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 NDUFAF4Q9P032 175 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 ENOPH1Q9UHY7 261 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 OAZ3Q9UMX2 235 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
PRPF38A-202ENST00000474048 TRAPPC13A5PLN9 417 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 A6NL46 340 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CLDN24A6NM45 220 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 NPIPB9F8W1W9 429 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 FAAHO00519 579 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CASQ2O14958 399 aaPredicted RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 NKX2-8O15522 239 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 GMFGO60234 142 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 OR6B1O95007 311 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 OR5F1O95221 314 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 NADKO95544 446 aaPredicted RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 GKN3PP0CG01 181 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 THRBP10828 461 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 PEX2P28328 305 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 MSX1P28360 303 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 ADH7P40394 386 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 P2RX1P51575 399 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 RAD23AP54725 363 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 SUMO3P55854 103 aaPredicted RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 SNTA1Q13424 505 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 DEFB109BQ30KR1 87 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 LPCAT4Q643R3 524 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 SLC30A6Q6NXT4 461 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 ISLR2Q6UXK2 745 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 MARCH3Q86UD3 253 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CDK20Q8IZL9 346 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 OFCC1Q8IZS5 231 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 BEST3Q8N1M1 668 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 PACRGLQ8N7B6 248 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 POGLUT1Q8NBL1 392 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 B4GALNT2Q8NHY0 566 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 ADAMTS16Q8TE57 1224 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 GRHL3Q8TE85 626 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 TMEM234Q8WY98 164 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 TM9SF4Q92544 642 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CNOT9Q92600 299 aaKnown RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 NRBF2Q96F24 287 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 SLC41A3Q96GZ6 507 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 C7orf34Q96L11 122 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 RBM4BQ9BQ04 359 aaKnown RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 RBM4Q9BWF3 364 aaKnown RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 MFRPQ9BY79 579 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 LAT2Q9GZY6 243 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 ANKRD19PQ9H560 264 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CTPS2Q9NRF8 586 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 SACM1LQ9NTJ5 587 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 DNAJB12Q9NXW2 375 aaKnown RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 GPR83Q9NYM4 423 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 PDP1Q9P0J1 537 aaPredicted RBP9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 RHCGQ9UBD6 479 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CARD8Q9Y2G2 431 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 WIF1Q9Y5W5 379 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 NINQ8N4C6 2090 aa9.42□□□□□ -0.9
PRPF38A-202ENST00000474048 CENPVL1A0A0U1RR11 272 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 ELOA3DA6NLF2 546 aaPredicted RBP9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 J3KTA2 159 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 OR10H3O60404 316 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 TPST2O60704 377 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 DPM1O60762 260 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 SLC25A12O75746 678 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 GP1BBP13224 206 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 HLCSP50747 726 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 CCL11P51671 97 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 UGT2B15P54855 530 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 UCNP55089 124 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 TPD52P55327 224 aaPredicted RBP9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 ARG2P78540 354 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 HOXC5Q00444 222 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 ALDH6A1Q02252 535 aaKnown RBP9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 Q0VFX4 171 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 EPS8Q12929 822 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 PIN1Q13526 163 aaPredicted RBP9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 RAPSNQ13702 412 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 OR1Q1Q15612 314 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 ELOA3BQ3SY89 546 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 ALG10BQ5I7T1 473 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 ATP1A1-AS1Q5TC04 95 aa9.41□□□□□ -0.9
PRPF38A-202ENST00000474048 OGFRL1Q5TC84 451 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms