RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FRRS1Q6ZNA5 592 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 OLIG3Q7RTU3 272 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 OR5W2Q8NH69 310 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 C10orf82Q8WW14 230 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 ASB5Q8WWX0 329 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 WDYHV1Q96HA8 205 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 TRIB1Q96RU8 372 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 DMRTA2Q96SC8 542 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 THUMPD3Q9BV44 507 aaKnown RBP12.46□□□□□ -0.41
USF1-205ENST00000473969 LAT2Q9GZY6 243 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 SAP130Q9H0E3 1048 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 ARMC7Q9H6L4 198 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 SLC52A3Q9NQ40 469 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 SAR1AQ9NR31 198 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 MED17Q9NVC6 651 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 SLAMF8Q9P0V8 285 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 ZNF232Q9UNY5 417 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.41
USF1-205ENST00000473969 A0A0G2JPF8 293 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 A1L4Q6 167 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 OR2M5A3KFT3 312 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 BBIP1A8MTZ0 92 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 HNRNPCL2B2RXH8 293 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 HNRNPCL3B7ZW38 293 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 ADAM10O14672 748 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 SLC22A2O15244 555 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 HNRNPCL1O60812 293 aaKnown RBP12.45□□□□□ -0.42
USF1-205ENST00000473969 DBIP07108 87 aaKnown RBP12.45□□□□□ -0.42
USF1-205ENST00000473969 CHRM4P08173 479 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 UBTFL6P0CB48 400 aaPredicted RBP12.45□□□□□ -0.42
USF1-205ENST00000473969 HNRNPCL4P0DMR1 293 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 ZNF17P17021 662 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 AGAP20933 346 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 ADH7P40394 386 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 MVDP53602 400 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 GYS2P54840 703 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 NUP107P57740 925 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 KCNJ10P78508 379 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 FUT5Q11128 374 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 CYLC2Q14093 348 aaPredicted RBP12.45□□□□□ -0.42
USF1-205ENST00000473969 FGFBP1Q14512 234 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 GCNT6Q5T4J0 391 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 LACC1Q8IV20 430 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 CMIPQ8IY22 773 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 UBQLNLQ8IYU4 475 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 DPP10Q8N608 796 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 METTL25Q8N6Q8 603 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 PCYOX1LQ8NBM8 494 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 OR5M1Q8NGP8 315 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 WDR60Q8WVS4 1066 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 SMPDL3BQ92485 455 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 SDCCAG3Q96C92 435 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 TMEM19Q96HH6 336 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 TTYH2Q9BSA4 534 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 SLC38A1Q9H2H9 487 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 SLC25A37Q9NYZ2 338 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 VAPAQ9P0L0 249 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 ZNF337Q9Y3M9 751 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
USF1-205ENST00000473969 AP4B1Q9Y6B7 739 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 TENM4Q6N022 2769 aa12.45□□□□□ -0.42
USF1-205ENST00000473969 ZNF407Q9C0G0 2248 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 LOC100653049A0A140TA62 436 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 PRAMEF27A3QJZ7 478 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 KRT34O76011 436 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 EPPINO95925 133 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 IL2RAP01589 272 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 TFPTP0C1Z6 253 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 PGCP20142 388 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 LHX2P50458 406 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 B3GALT5-AS1P59052 145 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 RPS3AP61247 264 aaKnown RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 ADORA2A-AS1P86434 159 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 LARS2Q15031 903 aaKnown RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 PLPPR5Q32ZL2 321 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 ACSF3Q4G176 576 aaPredicted RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 LIN52Q52LA3 116 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 RUNDC3AQ59EK9 446 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 DCST1Q5T197 706 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 PDSS1Q5T2R2 415 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 CBLN3Q6UW01 205 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 NCCRP1Q6ZVX7 275 aaPredicted RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 MAMDC2Q7Z304 686 aaPredicted RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 GTPBP8Q8N3Z3 284 aaPredicted RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 ZNF563Q8TA94 476 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 BBS10Q8TAM1 723 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 ZPLD1Q8TCW7 415 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 SLC38A5Q8WUX1 472 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
USF1-205ENST00000473969 TMEM234Q8WY98 164 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 CGREF1Q99674 301 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 SH3GL1Q99961 368 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 CALHM2Q9HA72 323 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 A4GALTQ9NPC4 353 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 GID8Q9NWU2 228 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 KCNE5Q9UJ90 142 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 ICAM5Q9UMF0 924 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 IFT52Q9Y366 437 aa12.44□□□□□ -0.42
USF1-205ENST00000473969 L3MBTL1Q9Y468 752 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms