RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SPTA1P02549 2419 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PLCE1Q9P212 2302 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF407Q9C0G0 2248 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 FREM1Q5H8C1 2179 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PRR14LQ5THK1 2151 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 PCNX2A6NKB5 2137 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 NCKAP5O14513 1909 aa1.27□□□□□ -2.21
CCDC39-203ENST00000473854 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TACC2O95359 2948 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ANK2Q01484 3957 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CSMD1Q96PZ7 3565 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 APC2O95996 2303 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 COL12A1Q99715 3063 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IGHV4-30-2A0A087WSY4 118 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 A0A0U1RQS6 177 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IQANK1A0A1B0GTG1 560 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 WI2-2373I1.2A0A1W2PRP0 233 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ARHGEF37A1IGU5 675 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 FAM168BA1KXE4 195 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NEMP2A6NFY4 417 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OR51F1A6NGY5 319 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ARHGAP42A6NI28 874 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC72A6NJI9 287 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CCT8L1PA6NM43 557 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 HIDE1A8MVS5 230 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 HEPACAM2A8MVW5 462 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MEI4A8MW99 385 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC33A1O00400 549 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 COPEO14579 308 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NDC80O14777 642 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TM9SF1O15321 606 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 COCHO43405 550 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SSX4O60224 188 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ACSL4O60488 711 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SNAP91O60641 907 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PLIN3O60664 434 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PRAMEF11O60813 436 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RNASEH1O60930 286 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PEX11AO75192 247 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 GLRA3O75311 464 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SNNO75324 88 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SH3BGRLO75368 114 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TADA2AO75478 443 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SPAG6O75602 509 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CREG1O75629 220 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZMPSTE24O75844 475 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CDK2AP2O75956 126 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZWINTO95229 277 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PGM3O95394 542 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PRAMEF12O95522 483 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OLFM2O95897 454 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CD160O95971 181 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 BCL10O95999 233 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IL1BP01584 269 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 JCHAINP01591 159 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CHRNGP07510 517 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 BPGMP07738 259 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RHOCP08134 193 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 GSTA1P08263 222 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 VIMP08670 466 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KRT16P08779 473 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PIRTP0C851 137 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC35E2BP0CK96 405 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC2A2P11168 524 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MLNP12872 115 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CCNB1P14635 433 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 GJA1P17302 382 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 HOXD10P28358 340 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PDHA2P29803 388 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ATP5DP30049 168 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CCR1P32246 355 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CD70P32970 193 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PHBP35232 272 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINB6P35237 376 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 GP5P40197 560 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CSKP41240 450 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CD86P42081 329 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 HCAR3P49019 387 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINB8P50452 374 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF140P52738 457 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NDST2P52849 883 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC18A1P54219 525 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PNLIPRP2P54317 469 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 AIF1P55008 147 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PRMT2P55345 433 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MAZP56270 477 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TAS2R39P59534 338 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RPS24P62847 133 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KCNJ2P63252 427 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IRX4P78413 519 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CDK16Q00536 496 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ACTN3Q08043 901 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SLC10A7Q0GE19 358 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 BST1Q10588 318 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TWF1Q12792 350 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OVGP1Q12889 678 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 EPS8Q12929 822 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CHAF1BQ13112 559 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NAB1Q13506 487 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 KRT33BQ14525 404 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms