RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 RNLSQ5VYX0 342 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 DPY19L4Q7Z388 723 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 IFNEQ86WN2 208 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 TMEM17Q86X19 198 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 ZDHHC21Q8IVQ6 265 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 BPIFB2Q8N4F0 458 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 RAET1EQ8TD07 263 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 VPS39Q96JC1 886 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 FOXN4Q96NZ1 517 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 TXN2Q99757 166 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 TM2D1Q9BX74 207 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 POLR3FQ9H1D9 316 aaPredicted RBP4.79□□□□□ -1.64
SEC22A-204ENST00000473494 UTP6Q9NYH9 597 aaKnown RBP4.79□□□□□ -1.64
SEC22A-204ENST00000473494 MRPL39Q9NYK5 338 aaKnown RBP4.79□□□□□ -1.64
SEC22A-204ENST00000473494 GMPPBQ9Y5P6 360 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 IFT172Q9UG01 1749 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 AGRNO00468 2067 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 GSAPA4D1B5 854 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 SAP18O00422 153 aaKnown RBP4.78□□□□□ -1.64
SEC22A-204ENST00000473494 XPO1O14980 1071 aaKnown RBP4.78□□□□□ -1.64
SEC22A-204ENST00000473494 EFNA2O43921 213 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 ALPIP09923 528 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 PDHBP11177 359 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 LAMP1P11279 417 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 TBXA2RP21731 343 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 OTX2P32243 289 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 CA8P35219 290 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 PTGER3P43115 390 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 TDO2P48775 406 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 RND3P61587 244 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 CAMK4Q16566 473 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 EIPR1Q53HC9 387 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 MEDAGQ5VYS4 303 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 PVRIGQ6DKI7 326 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 CES3Q6UWW8 571 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 UNC5CLQ8IV45 518 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 APOL2Q9BQE5 337 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 PNNQ9H307 717 aaKnown RBP4.78□□□□□ -1.64
SEC22A-204ENST00000473494 RMND5AQ9H871 391 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 TBK1Q9UHD2 729 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 SMC3Q9UQE7 1217 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 SPACA6W5XKT8 324 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 SPATA31E1Q6ZUB1 1445 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 SETBP1Q9Y6X0 1596 aa4.78□□□□□ -1.64
SEC22A-204ENST00000473494 XRN1Q8IZH2 1706 aaKnown RBP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ASXL1Q8IXJ9 1541 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 A0A087WWV3 80 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ZSCAN5CA6NGD5 496 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 A8MUI8 341 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 FAM220BPB1ANY3 271 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ZSCAN12O43309 604 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 SRPX2O60687 465 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 RHBDL1O75783 438 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 NEBLO76041 1014 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 TBX6O95947 436 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 IQCF3P0C7M6 154 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 PAX7P23759 505 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ACVR1BP36896 505 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 PEX6Q13608 980 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 RUNX3Q13761 415 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 DPYSL3Q14195 570 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 PDK4Q16654 411 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 CYP51A1Q16850 503 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 LANCL3Q6ZV70 420 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ZSCAN4Q8NAM6 433 aaPredicted RBP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 AGAP11Q8TF27 550 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ERP44Q9BS26 406 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ALG12Q9BV10 488 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 MEAF6Q9HAF1 191 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 AATFQ9NY61 560 aaKnown RBP eCLIP4.77□□□□□ -1.65
SEC22A-204ENST00000473494 CHRNA9Q9UGM1 479 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 SLC2A6Q9UGQ3 507 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 CRLS1Q9UJA2 301 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 LRRK1Q38SD2 2015 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 ROBO1Q9Y6N7 1651 aa4.77□□□□□ -1.65
SEC22A-204ENST00000473494 FAM74A7A6NL05 159 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 G3V3Y1 287 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 TRIM3O75382 744 aaPredicted RBP4.76□□□□□ -1.65
SEC22A-204ENST00000473494 SLC2A10O95528 541 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 CLUP10909 449 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 UMPSP11172 480 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 CPN1P15169 458 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 TPSB2P20231 275 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 NT5EP21589 574 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 RPL8P62917 257 aaKnown RBP4.76□□□□□ -1.65
SEC22A-204ENST00000473494 BDH1Q02338 343 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 CSTF1Q05048 431 aaKnown RBP4.76□□□□□ -1.65
SEC22A-204ENST00000473494 PUDPQ08623 228 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 TPSAB1Q15661 275 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 MAPK6Q16659 721 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 TPD52L1Q16890 204 aaPredicted RBP4.76□□□□□ -1.65
SEC22A-204ENST00000473494 TATDN3Q17R31 274 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 FAM74A3Q4VXF1 159 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 PPP1R42Q7Z4L9 355 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 NALCNQ8IZF0 1738 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 M1APQ8TC57 530 aa4.76□□□□□ -1.65
SEC22A-204ENST00000473494 SPRYD4Q8WW59 207 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms