RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MED28Q9H204 178 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 FOLH1BQ9HBA9 442 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 ACSL5Q9ULC5 683 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 A0A1W2PQ72 361 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 BTN3A3O00478 584 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 NOS1APO75052 506 aaPredicted RBP19.63■□□□□ 0.73
COL18A1-207ENST00000473212 CEACAM5P06731 702 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 THBS2P35442 1172 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 BDH1Q02338 343 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 NIPAL3Q6P499 406 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 ANGPTL6Q8NI99 470 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 FGF13Q92913 245 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 MED30Q96HR3 178 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 ACTRT3Q9BYD9 372 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 MKRN2Q9H000 416 aaKnown RBP19.63■□□□□ 0.73
COL18A1-207ENST00000473212 IL23AQ9NPF7 189 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 ATP13A2Q9NQ11 1180 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 FBXO34Q9NWN3 711 aa19.63■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF443Q9Y2A4 671 aaPredicted RBP19.63■□□□□ 0.73
COL18A1-207ENST00000473212 E9PI62 339 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 REM1O75628 298 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OR5F1O95221 314 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 UQCRC1P31930 480 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 BTCP35070 178 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 PITPNBP48739 271 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 FXYD6P3P58550 94 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 CST6Q15828 149 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 PUS10Q3MIT2 529 aaKnown RBP19.62■□□□□ 0.73
COL18A1-207ENST00000473212 KLHL12Q53G59 568 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 PSRC1Q6PGN9 363 aaPredicted RBP19.62■□□□□ 0.73
COL18A1-207ENST00000473212 GID4Q8IVV7 300 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 TIGD4Q8IY51 512 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 C7orf57Q8NEG2 295 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OR10H4Q8NGA5 316 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OR4E2Q8NGC2 313 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OR8H1Q8NGG4 311 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OR5W2Q8NH69 310 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OR52D1Q9H346 318 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 C20orf141Q9NUB4 165 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF624Q9P2J8 865 aaPredicted RBP19.62■□□□□ 0.73
COL18A1-207ENST00000473212 CACNG2Q9Y698 323 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 DAPL1A0PJW8 107 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 ICMTO60725 284 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 AHCYP23526 432 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 RFX3P48380 749 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 SIM1P81133 766 aaPredicted RBP19.62■□□□□ 0.73
COL18A1-207ENST00000473212 CDC73Q6P1J9 531 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 MEPCEQ7L2J0 689 aaKnown RBP19.62■□□□□ 0.73
COL18A1-207ENST00000473212 OAFQ86UD1 273 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 BMPERQ8N8U9 685 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 PFN4Q8NHR9 129 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 ZCCHC10Q8TBK6 192 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 ABHD1Q96SE0 405 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 NUDT15Q9NV35 164 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 STMN3Q9NZ72 180 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF780BQ9Y6R6 833 aa19.62■□□□□ 0.73
COL18A1-207ENST00000473212 C2orf16Q68DN1 1984 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 RBMS1P29558 406 aaKnown RBP19.61■□□□□ 0.73
COL18A1-207ENST00000473212 ACSL1P33121 698 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 GPR68Q15743 365 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 MAPK14Q16539 360 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 NTRK2Q16620 822 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 TANGO2Q6ICL3 276 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 SFXN4Q6P4A7 337 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF836Q6ZNA1 936 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 GET4Q7L5D6 327 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-207ENST00000473212 VN1R4Q7Z5H5 301 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 THAP10Q9P2Z0 257 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-207ENST00000473212 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF888P0CJ79 500 aaPredicted RBP19.61■□□□□ 0.73
COL18A1-207ENST00000473212 SLC3A1Q07837 685 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 SIGIRRQ6IA17 410 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 GHDCQ8N2G8 530 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 SUN5Q8TC36 379 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 TRIM36Q9NQ86 728 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF222Q9UK12 451 aa19.61■□□□□ 0.73
COL18A1-207ENST00000473212 ZNF860A6NHJ4 632 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 UNC119BA6NIH7 251 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 MRPL3P09001 348 aaKnown RBP19.6■□□□□ 0.73
COL18A1-207ENST00000473212 POU3F3P20264 500 aaPredicted RBP19.6■□□□□ 0.73
COL18A1-207ENST00000473212 SLC16A1P53985 500 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 ERVK-21P61565 698 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 E2F1Q01094 437 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 DUSP5Q16690 384 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 TJAP1Q5JTD0 557 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 VITQ6UXI7 678 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 LRRC17Q8N6Y2 441 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 FANK1Q8TC84 345 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 HSD17B8Q92506 261 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 TTC9Q92623 222 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 RAB7BQ96AH8 199 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 C10orf90Q96M02 699 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 C1QTNF2Q9BXJ5 285 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 PIGUQ9H490 435 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 RFPL3O75679 317 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 KAT7O95251 611 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 DHFRP00374 187 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 NPR2P20594 1047 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 F8A1P23610 371 aa19.6■□□□□ 0.73
COL18A1-207ENST00000473212 GJA4P35212 333 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms