RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, human

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD6-208	ENST00000471682	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	SAMD4B	Q5PRF9	694 aa	Known RBP	13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	OLIG3	Q7RTU3	272 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	ZNF440	Q8IYI8	595 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	ZNF614	Q8N883	585 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	RASSF5	Q8WWW0	418 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	ARSG	Q96EG1	525 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	OR2B2	Q9GZK3	357 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	QRSL1	Q9H0R6	528 aa	Known RBP	13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	DSN1	Q9H410	356 aa		13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.9	□□□□□ -0.18
COMMD6-208	ENST00000471682	CDHR4	A6H8M9	788 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ANKUB1	A6NFN9	424 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	FAM166B	A8MTA8	275 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	NPIPA5	E9PKD4	350 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	LINC01387	J3KSC0	135 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ATP5H	O75947	161 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	UBOX5	O94941	541 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	IFNA14	P01570	189 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	HSD17B1	P14061	328 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	DPP4	P27487	766 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	EEF1A1	P68104	462 aa	Known RBP	13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	CBX1	P83916	185 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	SLC25A3	Q00325	362 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZNF117	Q03924	483 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	BNIP1	Q12981	228 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	SKP2	Q13309	424 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ELOA	Q14241	798 aa	Known RBP	13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	FXN	Q16595	210 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	EIPR1	Q53HC9	387 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	PRR30	Q53SZ7	412 aa	Predicted RBP	13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZNF311	Q5JNZ3	666 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	COLEC12	Q5KU26	742 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	OR5M10	Q6IEU7	315 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ARHGAP11A	Q6P4F7	1023 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	DHRS4L2	Q6PKH6	230 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	MICU2	Q8IYU8	434 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	DEFB107A	Q8IZN7	70 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	GHDC	Q8N2G8	530 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	GATS	Q8NAP1	163 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	RBM15B	Q8NDT2	890 aa	Known RBP	13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ST6GALNAC3	Q8NDV1	305 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	MIB2	Q96AX9	1013 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	C1GALT1C1	Q96EU7	318 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	MED11	Q9P086	117 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	FBXL2	Q9UKC9	423 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	NPIPA1	Q9UND3	350 aa		13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.89	□□□□□ -0.19
COMMD6-208	ENST00000471682	SHANK1	Q9Y566	2161 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	C7orf72	A4D263	438 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	OR14I1	A6ND48	311 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682		B4DXG7	233 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	FAAH	O00519	579 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	TRAPPC6A	O75865	159 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	MFN2	O95140	757 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	C8B	P07358	591 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	HTR1E	P28566	365 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	GCK	P35557	465 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	SLC6A8	P48029	635 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	GSK3B	P49841	420 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	RASSF2	P50749	326 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	TLE1	Q04724	770 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	CBFB	Q13951	182 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	NHSL2	Q5HYW2	709 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	MRPL2	Q5T653	305 aa	Known RBP	13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	CBLN3	Q6UW01	205 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZNF836	Q6ZNA1	936 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	TRIL	Q7L0X0	811 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	PRICKLE2	Q7Z3G6	844 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	ARMC8	Q8IUR7	673 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	GALNT11	Q8NCW6	608 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	OR5W2	Q8NH69	310 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	FBXO27	Q8NI29	283 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZBTB8A	Q96BR9	441 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	PINK1	Q9BXM7	581 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	DNAJB12	Q9NXW2	375 aa	Known RBP	13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	ADA2	Q9NZK5	511 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	SEC14L3	Q9UDX4	400 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	DKKL1	Q9UK85	242 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	PRPF19	Q9UMS4	504 aa	Known RBP	13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	CARD8	Q9Y2G2	431 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	SVIL	O95425	2214 aa		13.88	□□□□□ -0.19
COMMD6-208	ENST00000471682	POLE	Q07864	2286 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	TRGV5	A0A0B4J1U4	118 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	FAM47E-STBD1	D6RA91	191 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682		M0QX08	132 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	ETV2	O00321	342 aa	Predicted RBP	13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	SYT5	O00445	386 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	AQP7	O14520	342 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZIC3	O60481	467 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	GCM2	O75603	506 aa	Predicted RBP	13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	UBTFL6	P0CB48	400 aa	Predicted RBP	13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	UQCRB	P14927	111 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	ZNF17	P17021	662 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	ADH6	P28332	368 aa		13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	EIF1	P41567	113 aa	Known RBP	13.87	□□□□□ -0.19
COMMD6-208	ENST00000471682	DLX5	P56178	289 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms