RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 OR1C1Q15619 314 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 LRRC23Q53EV4 343 aaPredicted RBP9□□□□□ -0.97
SF3A1-207ENST00000471342 SLC25A53Q5H9E4 307 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF311Q5JNZ3 666 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 ATAD3BQ5T9A4 648 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 AGAP7PQ5VUJ5 663 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 C1orf146Q5VVC0 180 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 HLA-DQA1Q5Y7H0 255 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 OR5M10Q6IEU7 315 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 RTL4Q6ZR62 310 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 ARMC8Q8IUR7 673 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 LSMEM1Q8N8F7 131 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 PSD4Q8NDX1 1056 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 GPR119Q8TDV5 335 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 SLC35B4Q969S0 331 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 SGCZQ96LD1 299 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 AGAP4Q96P64 663 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 TAAR6Q96RI8 345 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF426Q9BUY5 554 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 CHID1Q9BWS9 393 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 LAT2Q9GZY6 243 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 HOXD1Q9GZZ0 328 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 MAGIXQ9H6Y5 334 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 S100A14Q9HCY8 104 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 TUBA8Q9NY65 449 aaPredicted RBP9□□□□□ -0.97
SF3A1-207ENST00000471342 LRFN1Q9P244 771 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 RIMS3Q9UJD0 308 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 LHX6Q9UPM6 363 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 PCDHGB6Q9Y5F9 930 aa9□□□□□ -0.97
SF3A1-207ENST00000471342 MAP1BP46821 2468 aaKnown RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 IGKV1D-42A0A075B6H8 117 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 FAAHO00519 579 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 RRP8O43159 456 aaKnown RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 DPM1O60762 260 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 FZD7O75084 574 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 NPIPB7O75200 414 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 DIRAS1O95057 198 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ITGB2P05107 769 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 CELA3AP09093 270 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 IL11P20809 199 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 CNR1P21554 472 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 SLC7A1P30825 629 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 DNASE1L1P49184 302 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 KCNAB2Q13303 367 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 FHL1Q13642 323 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 LIN52Q52LA3 116 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 INTS11Q5TA45 600 aaKnown RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 PRAMEF20Q5VT98 475 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 SLC22A10Q63ZE4 541 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF324BQ6AW86 544 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 TIGD3Q6B0B8 471 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ZNF770Q6IQ21 691 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 BORAQ6PGQ7 559 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ARSKQ6UWY0 536 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 CARM1Q86X55 608 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 SIAH3Q8IW03 269 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 CMIPQ8IY22 773 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 DND1Q8IYX4 353 aaKnown RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 CYP4Z2PQ8N1L4 340 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ZFP62Q8NB50 900 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 PYDC1Q8WXC3 89 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ASB15Q8WXK1 588 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 MCUR1Q96AQ8 359 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 TMEM41AQ96HV5 264 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 GNRHR2Q96P88 292 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 UBL7Q96S82 380 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 GPA33Q99795 319 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 PKP2Q99959 881 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ACER3Q9NUN7 267 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 HPF1Q9NWY4 346 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 IFT52Q9Y366 437 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 WIF1Q9Y5W5 379 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 ENPP4Q9Y6X5 453 aa8.99□□□□□ -0.97
SF3A1-207ENST00000471342 A0A0B4J2E0 115 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 A0A1B0GX12 115 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 DHRS12A0PJE2 317 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 DLGAP1O14490 977 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 SCO2O43819 266 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 EIF4E2O60573 245 aaKnown RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 FKBP6O75344 327 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 FAM87AP0C7U9 286 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 UMPSP11172 480 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 ENDOUP21128 410 aaKnown RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 CYB561P49447 251 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 IST1P53990 364 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 PSMD4P55036 377 aaKnown RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 UCNP55089 124 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 NRG3P56975 720 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 CXADRP78310 365 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 EGR4Q05215 589 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 PIN1Q13526 163 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 GNA13Q14344 377 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 SEC23BQ15437 767 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 PLEKHN1Q494U1 663 aaPredicted RBP8.98□□□□□ -0.97
SF3A1-207ENST00000471342 MTX3Q5HYI7 312 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 ABHD17BQ5VST6 288 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 SLC25A25Q6KCM7 469 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 SLC30A6Q6NXT4 461 aa8.98□□□□□ -0.97
SF3A1-207ENST00000471342 TBPL2Q6SJ96 375 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms