RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CLK3P49761 638 aaKnown RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 GZMKP49863 264 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 RAE1P78406 368 aaKnown RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 SRYQ05066 204 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 MAP4K2Q12851 820 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 FOXL1Q12952 345 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 EFR3AQ14156 821 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 CHI3L2Q15782 390 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 NTRK2Q16620 822 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ZNF791Q3KP31 576 aaPredicted RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 SPDYE7PQ495Y7 208 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ZNF628Q5EBL2 1059 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ARL13AQ5H913 290 aaPredicted RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 FNDC7Q5VTL7 733 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 HHATQ5VTY9 493 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 AP1ARQ63HQ0 302 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 KANK2Q63ZY3 851 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 BICRALQ6AI39 1079 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 NOXRED1Q6NXP6 359 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 GALNT18Q6P9A2 607 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 LYPD8Q6UX82 237 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 LARP4Q71RC2 724 aaKnown RBP eCLIP5.23□□□□□ -1.57
VARS-222ENST00000470953 TRIM46Q7Z4K8 759 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 R3HCC1LQ7Z5L2 792 aaKnown RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 SLC44A2Q8IWA5 706 aaPredicted RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 KIRREL3Q8IZU9 778 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ANKRD42Q8N9B4 389 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 FNDC5Q8NAU1 212 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 OR4K17Q8NGC6 315 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 OR1J4Q8NGS1 313 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 SPPL2AQ8TCT8 520 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ZPLD1Q8TCW7 415 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ZNF675Q8TD23 568 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 MGARPQ8TDB4 240 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 PAQR8Q8TEZ7 354 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ABTB1Q969K4 478 aaPredicted RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 TMBIM1Q969X1 311 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 TUBGCP3Q96CW5 907 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ERP27Q96DN0 273 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 PPP1R36Q96LQ0 422 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 HS6ST2Q96MM7 605 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 COL21A1Q96P44 957 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 C1orf50Q9BV19 199 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 PRR14Q9BWN1 585 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 KLHL4Q9C0H6 718 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 UBQLN3Q9H347 655 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 FOLH1BQ9HBA9 442 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 C3orf14Q9HBI5 128 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 Q9N2J8 555 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 ATAD3AQ9NVI7 634 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 QPCTLQ9NXS2 382 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 NKIRAS1Q9NYS0 192 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 CLCF1Q9UBD9 225 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 MAPRE3Q9UPY8 281 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 B3GALT5Q9Y2C3 310 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 TMED5Q9Y3A6 229 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 TRAF6Q9Y4K3 522 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 SNX8Q9Y5X2 465 aa5.23□□□□□ -1.57
VARS-222ENST00000470953 CHCHD2Q9Y6H1 151 aaPredicted RBP5.23□□□□□ -1.57
VARS-222ENST00000470953 SERTM1A2A2V5 107 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 CLOCKO15516 846 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 CFLARO15519 480 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 SCO2O43819 266 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 PEX11AO75192 247 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 TRIM3O75382 744 aaPredicted RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 KCNH1O95259 989 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 CBX7O95931 251 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 CLPSP04118 112 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 SERPINE1P05121 402 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 BPGMP07738 259 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 IMPDH2P12268 514 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 CYP4B1P13584 511 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 HPGDP15428 266 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 SDC1P18827 310 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 KIR2DL2P43627 348 aaPredicted RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 PPICP45877 212 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 PCYT1AP49585 367 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 CDK9P50750 372 aaKnown RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 NUDT6P53370 316 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 PRKAG1P54619 331 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 PSMD4P55036 377 aaKnown RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 MANFP55145 182 aaKnown RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 CORO7P57737 925 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 LOXL3P58215 753 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 HILS1P60008 231 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 LSM11P83369 360 aaKnown RBP eCLIP5.22□□□□□ -1.571e-8■■□□□ 12.7
VARS-222ENST00000470953 PRR5P85299 388 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 DUSP2Q05923 314 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 STX5Q13190 355 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 MAD2L1Q13257 205 aaPredicted RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 RCAN2Q14206 197 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 DECR1Q16698 335 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 VPS26BQ4G0F5 336 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 TRMT12Q53H54 448 aaKnown RBP5.22□□□□□ -1.57
VARS-222ENST00000470953 NHSL2Q5HYW2 709 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 FAM71E1Q6IPT2 247 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 ANKRD26P1Q6NSI1 321 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 SLC30A6Q6NXT4 461 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 WFDC8Q8IUA0 241 aa5.22□□□□□ -1.57
VARS-222ENST00000470953 ZNF615Q8N8J6 731 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms