RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 LINGO3P0C6S8 592 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ZCCHC18P0CG32 403 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 PRF1P14222 555 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 POU3F2P20265 443 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-215ENST00000470338 CTSSP25774 331 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 PSMA4P25789 261 aaKnown RBP12.76□□□□□ -0.37
TOP3B-215ENST00000470338 KHKP50053 298 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 P2RX1P51575 399 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF41P51814 821 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-215ENST00000470338 AQP5P55064 265 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 EEFSECP57772 596 aaKnown RBP12.76□□□□□ -0.37
TOP3B-215ENST00000470338 FUT5Q11128 374 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 GPR68Q15743 365 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 PLPPR5Q32ZL2 321 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ATAD3BQ5T9A4 648 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 CBLN3Q6UW01 205 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 C16orf62Q7Z3J2 963 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 RNF130Q86XS8 419 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 MEIOBQ8N635 442 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 RELL2Q8NC24 303 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-215ENST00000470338 OR9I1Q8NGQ6 314 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 OIT3Q8WWZ8 545 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 STON2Q8WXE9 905 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ROPN1LQ96C74 230 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ZFP3Q96NJ6 502 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 NPAS1Q99742 590 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 TM9SF2Q99805 663 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ACBD3Q9H3P7 528 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 SLC6A13Q9NSD5 602 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 MED17Q9NVC6 651 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 MKLN1Q9UL63 735 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 ICAM5Q9UMF0 924 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 CARD8Q9Y2G2 431 aa12.76□□□□□ -0.37
TOP3B-215ENST00000470338 SERINC4A6NH21 518 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 SHISA8B8ZZ34 492 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 H3BML4 177 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 GTPBP1O00178 669 aaKnown RBP12.75□□□□□ -0.37
TOP3B-215ENST00000470338 SYT5O00445 386 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
TOP3B-215ENST00000470338 TNFRSF21O75509 655 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 UGT2B17O75795 530 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 MPDZO75970 2070 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 IL18BPO95998 194 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 BMP5P22003 454 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 MAGEA8P43361 318 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 SUMO3P55854 103 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-215ENST00000470338 CLDN20P56880 219 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 TYW3Q6IPR3 259 aaKnown RBP12.75□□□□□ -0.37
TOP3B-215ENST00000470338 PLXDC2Q6UX71 529 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 MEX3BQ6ZN04 569 aaKnown RBP12.75□□□□□ -0.37
TOP3B-215ENST00000470338 FRRS1Q6ZNA5 592 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 OLIG3Q7RTU3 272 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 MCEMP1Q8IX19 187 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 UBQLNLQ8IYU4 475 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF295-AS1Q8N0V1 137 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 POC1BQ8TC44 478 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 GPR119Q8TDV5 335 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 ZFP90Q8TF47 636 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 VPS33AQ96AX1 596 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 ITCHQ96J02 903 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 TRIM8Q9BZR9 551 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 RMND5AQ9H871 391 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 STOML1Q9UBI4 398 aa12.75□□□□□ -0.37
TOP3B-215ENST00000470338 CENPVL1A0A0U1RR11 272 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 H0YC42 278 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF264O43296 627 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 KIAA0513O60268 411 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 EDF1O60869 148 aaKnown RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 DNAJA2O60884 412 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 KRT75O95678 551 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 TGM6O95932 706 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 TMIGD3P0DMS9 266 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 OPRM1P35372 400 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 ANXA11P50995 505 aaKnown RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 MVDP53602 400 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 TPD52P55327 224 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 STX1BP61266 288 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 RAC1P63000 192 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 IRX1P78414 480 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 FBXL19-AS1Q494R0 122 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 TIGD2Q4W5G0 525 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 COX20Q5RI15 118 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 CHMP1BQ7LBR1 199 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 GGNQ86UU5 652 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 FUNDC1Q8IVP5 155 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 DMRTC2Q8IXT2 367 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 METTL25Q8N6Q8 603 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 ZNF614Q8N883 585 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 GTF2H4Q92759 462 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 ARSGQ96EG1 525 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 TRNT1Q96Q11 434 aaKnown RBP12.74□□□□□ -0.37
TOP3B-215ENST00000470338 LAT2Q9GZY6 243 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 SLC52A3Q9NQ40 469 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 JKAMPQ9P055 326 aa12.74□□□□□ -0.37
TOP3B-215ENST00000470338 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms