RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 WLSQ5T9L3 541 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PLAG1Q6DJT9 500 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CDC73Q6P1J9 531 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 LRRC74BQ6ZQY2 392 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 NDUFAF7Q7L592 441 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SERPINA11Q86U17 422 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF441Q8N8Z8 693 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CDRT4Q8N9R6 151 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF248Q8NDW4 579 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 OR7G1Q8NGA0 311 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SLC38A5Q8WUX1 472 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 KCNE4Q8WWG9 221 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 XAGE5Q8WWM1 108 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PSMF1Q92530 271 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SLC9A6Q92581 669 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 JADE3Q92613 823 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CDS1Q92903 461 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 STMN2Q93045 179 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 KIAA1143Q96AT1 154 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-208ENST00000470268 MOAP1Q96BY2 351 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SLC35G5Q96KT7 338 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 OR7D2Q96RA2 312 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SYT3Q9BQG1 590 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 ACTRT3Q9BYD9 372 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 NXF5Q9H1B4 397 aaKnown RBP4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PIGUQ9H490 435 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 DCLRE1BQ9H816 532 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 STX18Q9P2W9 335 aaKnown RBP4.35□□□□□ -1.71
SF3B1-208ENST00000470268 DKK4Q9UBT3 224 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PRSS50Q9UI38 385 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 ANGPTL2Q9UKU9 493 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SPTBN4Q9H254 2564 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CCDC88CQ9P219 2028 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 C15orf38-AP3S2A0A0A6YYH1 394 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TRBV11-1A0A0K0K1C0 115 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 A8MVJ9 347 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 EVPLLA8MZ36 301 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PCDH17O14917 1159 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 COQ9O75208 318 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NKX2-2O95096 273 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HPP00738 406 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 LPLP06858 475 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CHRM4P08173 479 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TFPTP0C1Z6 253 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HSD17B1P14061 328 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NCK1P16333 377 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ATP6V1B2P21281 511 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PPIBP23284 216 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 GABRA3P34903 492 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 LGALS4P56470 323 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 EEFSECP57772 596 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 DSTNP60981 165 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF155Q12901 538 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FADDQ13158 208 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FLOT2Q14254 428 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 VMACQ2NL98 169 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 DCAF10Q5QP82 559 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 B3GNTL1Q67FW5 361 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FCRLBQ6BAA4 426 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HEPHL1Q6MZM0 1159 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TCTN3Q6NUS6 607 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 BHLHB9Q6PI77 547 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HSDL2Q6YN16 418 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ARPINQ7Z6K5 226 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 HMGN2P46Q86SG4 172 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SLC44A2Q8IWA5 706 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 LGI4Q8N135 537 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ARHGAP24Q8N264 748 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ANKFN1Q8N957 763 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 C7orf57Q8NEG2 295 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 OR2T12Q8NG77 320 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ADAMTS15Q8TE58 950 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SLCO4A1Q96BD0 722 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ZG16BQ96DA0 208 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 VMP1Q96GC9 406 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ART5Q96L15 291 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 BTBD9Q96Q07 612 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CCNL2Q96S94 520 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SH3GL1Q99961 368 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ECSITQ9BQ95 431 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 LMF2Q9BU23 707 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 WWTR1Q9GZV5 400 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 QRSL1Q9H0R6 528 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SEMA6AQ9H2E6 1030 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 TMEM38AQ9H6F2 299 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 MMP25Q9NPA2 562 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 DUSP22Q9NRW4 184 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 NDE1Q9NXR1 346 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 KCNE5Q9UJ90 142 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PRPF19Q9UMS4 504 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 EDARQ9UNE0 448 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 FAF1Q9UNN5 650 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 PCDHGB5Q9Y5G0 923 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 V9GYQ6 96 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SPENQ96T58 3664 aaKnown RBP4.34□□□□□ -1.71
SF3B1-208ENST00000470268 CENPVL1A0A0U1RR11 272 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 C2orf92A0A1B0GVN3 265 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 ELOVL7A1L3X0 281 aa4.34□□□□□ -1.71
SF3B1-208ENST00000470268 SYNDIG1LA6NDD5 238 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms