RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 NAA20P61599 178 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 RPS13P62277 151 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 TXNL4AP83876 142 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 TIAL1Q01085 375 aaKnown RBP eCLIP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 CLCQ05315 142 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 SNTA1Q13424 505 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 LAPTM5Q13571 262 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 NFYCQ13952 458 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 GK3PQ14409 553 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 BCL2A1Q16548 175 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 NRF1Q16656 503 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 UGT3A2Q3SY77 523 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ANKRD34AQ69YU3 496 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 KRT80Q6KB66 452 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 C8orf82Q6P1X6 216 aaPredicted RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 VWA1Q6PCB0 445 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 BHLHB9Q6PI77 547 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 SLCO4C1Q6ZQN7 724 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 FUNDC1Q8IVP5 155 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR4N5Q8IXE1 308 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 AQP12AQ8IXF9 295 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 NKAPQ8N5F7 415 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PACRGLQ8N7B6 248 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ACOT4Q8N9L9 421 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 TSPAN14Q8NG11 270 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 STAG3L4Q8TBR4 150 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 FBXW5Q969U6 566 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 CTHRC1Q96CG8 243 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PLPPR2Q96GM1 343 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PDLIM5Q96HC4 596 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 NSUN5Q96P11 429 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 F2RL3Q96RI0 385 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 KCNA7Q96RP8 456 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ATOH8Q96SQ7 321 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PRPF18Q99633 342 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 CCT7Q99832 543 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMEM79Q9BSE2 394 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 DERL2Q9GZP9 239 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PFDN4Q9NQP4 134 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 TAS2R10Q9NYW0 307 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 GPRC5BQ9NZH0 403 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PROCRQ9UNN8 238 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 RNF11Q9Y3C5 154 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 WIF1Q9Y5W5 379 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PTGDR2Q9Y5Y4 395 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 C7orf72A4D263 438 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SLC22A20A6NK97 555 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SYCE1LA8MT33 242 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 HRKO00198 91 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 NME4O00746 187 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 HCRTR2O43614 444 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 TGM6O95932 706 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 PGRP06401 933 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 RPS17P08708 135 aaKnown RBP8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 LINC00032P0C843 101 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 HSD17B1P14061 328 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 IDO1P14902 403 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SRD5A1P18405 259 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 HIST1H1TP22492 207 aaPredicted RBP8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 BUD31P41223 144 aaPredicted RBP8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 KIR2DL2P43627 348 aaPredicted RBP8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 STARP49675 285 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 LHX2P50458 406 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 DSCR9P59020 149 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 LCP2Q13094 533 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SLAMF1Q13291 335 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 VPS26BQ4G0F5 336 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 TMEM35AQ53FP2 167 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 PAGE2BQ5JRK9 111 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 CYB5R2Q6BCY4 276 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 ADAM5Q6NVV9 412 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 TMEM81Q6P7N7 255 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SBSNQ6UWP8 590 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 PLXDC2Q6UX71 529 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 TMEM64Q6YI46 380 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 ZBTB49Q6ZSB9 765 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 FRA10AC1Q70Z53 315 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 NUP54Q7Z3B4 507 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 CARM1Q86X55 608 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 METTL25Q8N6Q8 603 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 TRIML2Q8N7C3 387 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 ZNF610Q8N9Z0 462 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SFXN2Q96NB2 322 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 TNFRSF13CQ96RJ3 184 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 SLC29A1Q99808 456 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 CIB1Q99828 191 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 PLA2G12AQ9BZM1 189 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 OR2B2Q9GZK3 357 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 MUC13Q9H3R2 512 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 EHD1Q9H4M9 534 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 ALG2Q9H553 416 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 DNAJC11Q9NVH1 559 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 ARMC1Q9NVT9 282 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 CMTM6Q9NX76 183 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 KLRF1Q9NZS2 232 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 ABCD2Q9UBJ2 740 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 PHF11Q9UIL8 331 aa8.02□□□□□ -1.13
SYNGAP1-205ENST00000470232 PCDHGB4Q9UN71 923 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms