RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF773Q6PK81 442 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 CD300LDQ6UXZ3 194 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 WDR88Q6ZMY6 472 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 MBOAT2Q6ZWT7 520 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 ZNF550Q7Z398 422 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 CPEB2Q7Z5Q1 589 aaKnown RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 APCDD1LQ8NCL9 501 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 NFAM1Q8NET5 270 aaPredicted RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 ZNF566Q969W8 418 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 LRFN5Q96NI6 719 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 LPAR4Q99677 370 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 STRADBQ9C0K7 418 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 HOXD1Q9GZZ0 328 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 ZNF223Q9UK11 482 aaPredicted RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 B3GALT1Q9Y5Z6 326 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 C4orf47A7E2U8 309 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 GSTM3P21266 225 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 GPR4P46093 362 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 GABARAPL2P60520 117 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 CDC42P60953 191 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 RNF4P78317 190 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 ZNF613Q6PF04 617 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 FAM198BQ6UWH4 519 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 SLCO6A1Q86UG4 719 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 ZNF441Q8N8Z8 693 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 GALNT6Q8NCL4 622 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 WDR77Q9BQA1 342 aaPredicted RBP16.68■□□□□ 0.26
SMC4-211ENST00000469858 FAM192AQ9GZU8 254 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 WDR54Q9H977 334 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 PAK1IP1Q9NWT1 392 aaPredicted RBP16.68■□□□□ 0.26
SMC4-211ENST00000469858 NXT1Q9UKK6 140 aaKnown RBP16.68■□□□□ 0.26
SMC4-211ENST00000469858 SLC35A3Q9Y2D2 325 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 C9J4A7 227 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 TO15178 435 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 ICOSLGO75144 302 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 OR6B1O95007 311 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 LYPD3O95274 346 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 CXCR4P61073 352 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 PIGFQ07326 219 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 TSPAN31Q12999 210 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 CD226Q15762 336 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 DCAF12Q5T6F0 453 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 BROXQ5VW32 411 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 HSDL2Q6YN16 418 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 P3H2Q8IVL5 708 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 CCDC103Q8IW40 242 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 SLC35B4Q969S0 331 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 OMA1Q96E52 524 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 HSPBAP1Q96EW2 488 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 SEMA4CQ9C0C4 833 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 ZNF226Q9NYT6 803 aa16.68■□□□□ 0.26
SMC4-211ENST00000469858 C19orf25Q9UFG5 118 aaPredicted RBP16.68■□□□□ 0.26
SMC4-211ENST00000469858 WDFY3Q8IZQ1 3526 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 A0A0B4J2E0 115 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 A0A1B0GWA3 101 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 A0A1B0GX12 115 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 FAM20BO75063 409 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 ABCD3P28288 659 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 E2F1Q01094 437 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 TMEM205Q6UW68 189 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 KCTD8Q6ZWB6 473 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 RAB11FIP2Q7L804 512 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 SLC34A3Q8N130 599 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 CADM2Q8N3J6 435 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 RHOXF1Q8NHV9 184 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 PHOSPHO1Q8TCT1 267 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 THAP3Q8WTV1 239 aaPredicted RBP16.67■□□□□ 0.26
SMC4-211ENST00000469858 TMEM239Q8WW34 195 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 CDC6Q99741 560 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 TRIM2Q9C040 744 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 DSN1Q9H410 356 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 EGLN3Q9H6Z9 239 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 KRCC1Q9NPI7 259 aaPredicted RBP16.67■□□□□ 0.26
SMC4-211ENST00000469858 SCN3BQ9NY72 215 aa16.67■□□□□ 0.26
SMC4-211ENST00000469858 PMS2P1A4D2B8 440 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 KPNA4O00629 521 aaPredicted RBP16.66■□□□□ 0.26
SMC4-211ENST00000469858 TSPAN2O60636 221 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 ALDH3B2P48448 385 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 ISXQ2M1V0 245 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 FNDC7Q5VTL7 733 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 SLX4IPQ5VYV7 408 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 APOOLQ6UXV4 268 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 KIF18BQ86Y91 864 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 IQCF1Q8N6M8 205 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 C17orf47Q8NEP4 570 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 PFN4Q8NHR9 129 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 VMP1Q96GC9 406 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 RHNO1Q9BSD3 238 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 POLR1BQ9H9Y6 1135 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 TPRKBQ9Y3C4 175 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 TRBV11-1A0A0K0K1C0 115 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 TNFRSF10AO00220 468 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 CHP2O43745 196 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 HTR1AP08908 422 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 UBL4AP11441 157 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 TBXA2RP21731 343 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 FPR3P25089 353 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 RAB15P59190 212 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 NCF4Q15080 339 aa16.66■□□□□ 0.26
SMC4-211ENST00000469858 ALG10BQ5I7T1 473 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms