RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 POLD4Q9HCU8 107 aa3.43□□□□□ -1.86
XRN1-207ENST00000468894 DAZ3Q9NR90 486 aaKnown RBP3.43□□□□□ -1.86
XRN1-207ENST00000468894 NINJ2Q9NZG7 142 aa3.43□□□□□ -1.86
XRN1-207ENST00000468894 CD274Q9NZQ7 290 aa3.43□□□□□ -1.86
XRN1-207ENST00000468894 UBQLN1Q9UMX0 589 aaKnown RBP3.43□□□□□ -1.86
XRN1-207ENST00000468894 RNF6Q9Y252 685 aa3.43□□□□□ -1.86
XRN1-207ENST00000468894 WDR45Q9Y484 360 aa3.43□□□□□ -1.86
XRN1-207ENST00000468894 A0A0U1RQV5 110 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 RNF103-CHMP3A0A140T963 221 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 K7N7A8 449 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 DUX1O43812 170 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 ASNSP08243 561 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 GCFC2P16383 781 aaKnown RBP3.42□□□□□ -1.86
XRN1-207ENST00000468894 AQP1P29972 269 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 OSTNP61366 133 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 MECOMQ03112 1051 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 KHDRBS2Q5VWX1 349 aaKnown RBP3.42□□□□□ -1.86
XRN1-207ENST00000468894 ANKRD37Q7Z713 158 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 ZNF100Q8IYN0 542 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 HDDC3Q8N4P3 179 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 ZNF433Q8N7K0 673 aaPredicted RBP3.42□□□□□ -1.86
XRN1-207ENST00000468894 DCUN1D4Q92564 292 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 PINX1Q96BK5 328 aaKnown RBP3.42□□□□□ -1.86
XRN1-207ENST00000468894 RNF126Q9BV68 326 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 NANSQ9NR45 359 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 AGPAT5Q9NUQ2 364 aa3.42□□□□□ -1.86
XRN1-207ENST00000468894 ISY1Q9ULR0 285 aaKnown RBP3.42□□□□□ -1.86
XRN1-207ENST00000468894 ANKRD30BLA7E2S9 258 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 TMEM110-MUSTN1A8MSY1 372 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 ABCD4O14678 606 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 STMN1P16949 149 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 ZNF32P17041 273 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 NTSP30990 170 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 BTDP43251 543 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 BDKRB1P46663 353 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 NTHL1P78549 312 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 RGS1Q08116 209 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 CEBPEQ15744 281 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 CDC37Q16543 378 aaPredicted RBP3.41□□□□□ -1.86
XRN1-207ENST00000468894 TIGITQ495A1 244 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 Q6P435 159 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 RBM43Q6ZSC3 357 aaKnown RBP3.41□□□□□ -1.86
XRN1-207ENST00000468894 LHFPL4Q7Z7J7 247 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 TMEM110Q86TL2 294 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 ENTHD1Q8IYW4 607 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 OR52B4Q8NGK2 314 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 CNIH3Q8TBE1 160 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 GIPC3Q8TF64 312 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 SLC35E1Q96K37 410 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 SLC30A2Q9BRI3 323 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 NANOGQ9H9S0 305 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 MYOZ2Q9NPC6 264 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 ZNF331Q9NQX6 463 aaPredicted RBP3.41□□□□□ -1.86
XRN1-207ENST00000468894 MRPL39Q9NYK5 338 aaKnown RBP3.41□□□□□ -1.86
XRN1-207ENST00000468894 ANAPC7Q9UJX3 599 aa3.41□□□□□ -1.86
XRN1-207ENST00000468894 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.4□□□□□ -1.87
XRN1-207ENST00000468894 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.4□□□□□ -1.87
XRN1-207ENST00000468894 SEC22BO75396 215 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 SUPT7LO94864 414 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 HBQ1P09105 142 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 THRBP10828 461 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 PSG2P11465 335 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 ATP6V1E1P36543 226 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 CFAP221Q4G0U5 840 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 LINC01620Q4KN68 170 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 CCDC92Q53HC0 331 aaPredicted RBP3.4□□□□□ -1.87
XRN1-207ENST00000468894 RAET1GQ6H3X3 334 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 TIFABQ6ZNK6 161 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 ERASQ7Z444 233 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 LCA5Q86VQ0 697 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 CBWD2Q8IUF1 395 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 EGFL6Q8IUX8 553 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 OR9A1PQ8NGU1 263 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 FBXO30Q8TB52 745 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 HPDLQ96IR7 371 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 FAM111AQ96PZ2 611 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 EBF4Q9BQW3 602 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 HSD3B7Q9H2F3 369 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 PIN4Q9Y237 131 aaKnown RBP3.4□□□□□ -1.87
XRN1-207ENST00000468894 CUX2O14529 1486 aa3.4□□□□□ -1.87
XRN1-207ENST00000468894 ABCC9O60706 1549 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 ESYT2A0FGR8 921 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 OR6C65A6NJZ3 312 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 USP27XA6NNY8 438 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 RASGRF2O14827 1237 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 ZNF264O43296 627 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 LANCL1O43813 399 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 PTBP3O95758 552 aaKnown RBP3.39□□□□□ -1.87
XRN1-207ENST00000468894 SERPINA2P20848 420 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 DNAJB1P25685 340 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 PTGFRP43088 359 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 LAGE3Q14657 143 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 ATXN7L3Q14CW9 347 aaPredicted RBP3.39□□□□□ -1.87
XRN1-207ENST00000468894 DNM1P46Q6ZS02 220 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 Q8N9L7 120 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 DCAF4L2Q8NA75 395 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 OR2AP1Q8NGE2 309 aa3.39□□□□□ -1.87
XRN1-207ENST00000468894 NANPQ8TBE9 248 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms